Rathayibacter tanaceti: GSU10_04375
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Entry
GSU10_04375 CDS
T06377
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rte
Rathayibacter tanaceti
Pathway
rte03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GSU10_04375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rte03400
]
GSU10_04375
DNA repair and recombination proteins [BR:
rte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GSU10_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
QHC54955
UniProt:
A0AAE6RI98
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All DBs
Position
complement(917371..918399)
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AA seq
342 aa
AA seq
DB search
MRAIWKGAITFGLVNVPVKVYSATEDHDIALHQVHDRDGGRIRYQRRCEVCGEVVGFDHI
DKAYDDGERTVVLTKDELKALPEERDREIDVVQFVPSEQVDPIMFDRAYILEPDSSSPKA
YVLLRRTLEQTDRTAIVEFALRQKTRLAALRVRGTTLMLQTLLWADEVREVEFPALQGTT
RIAARELEMSANLVDSYSEDFDAAKFHDAYQEELRTLIDAKIDQGDALDTAATFGDSAEE
EGGGEVLDLMEALKRSVERSRGARVGDGAATNAGAEKPGAKTSTTTTTTPAKKTPAKKGP
VRTTPAKKTGAAKTTEEAPATAETPTKKTSRTRKSTPAKAAS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgagccatctggaagggcgcgatcaccttcggcctggtcaacgtgccggtgaaggtc
tacagcgcgaccgaggaccacgacatcgcactgcaccaggtgcacgaccgcgacggcgga
cggatccgctaccagcgcaggtgcgaggtctgtggcgaggtggtcggcttcgaccacatc
gacaaggcctacgacgacggcgagcgcacggtcgtgctcaccaaggacgagctgaaggcg
ctgccggaggagcgcgaccgcgagatcgacgtggtgcagttcgtgccgagcgagcaggtc
gatccgatcatgttcgaccgcgcgtacatcctcgagcccgactcctcctcgcccaaggcc
tacgtgctgctgcggcggacgctcgagcagaccgaccgcacggcgatcgtcgagttcgcc
ctgcggcagaagacgcgtctcgccgcgctccgcgtgcgcggcacgacgctcatgctgcag
acactgctgtgggccgacgaggtccgcgaggtggagttcccagcgctgcaggggacgacg
aggatcgcggcccgcgagctcgagatgtcggcgaacctcgtcgactcctactccgaggac
ttcgacgccgcgaagttccacgacgcctaccaggaggaactgcgcaccctcatcgacgcg
aagatcgaccagggcgacgcgctcgacaccgccgcgaccttcggcgactctgcggaggag
gagggcggcggagaggtgctcgatctgatggaggcgctcaagcgctcggtcgagcgcagc
cgcggcgcccgggtcggtgacggcgcggcgacgaacgcgggcgcggagaagcccggggcg
aagacgagcaccaccacgacgacgacaccggcgaagaagacaccagcgaagaagggtccg
gtgcggacgacgccagcgaagaagaccggcgcggcgaaaacgacggaggaggctcccgcg
accgccgagacgcccacgaagaagacatcgaggacgaggaagagcacacccgcgaaggcc
gcctcctga
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