Rathayibacter tanaceti: GSU10_04815
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Entry
GSU10_04815 CDS
T06377
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rte
Rathayibacter tanaceti
Pathway
rte03420
Nucleotide excision repair
rte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GSU10_04815
03430 Mismatch repair
GSU10_04815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rte03400
]
GSU10_04815
Enzymes [BR:
rte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSU10_04815
DNA repair and recombination proteins [BR:
rte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSU10_04815
MMR (mismatch excision repair)
Other MMR factors
GSU10_04815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
Motif
Other DBs
NCBI-ProteinID:
QHC56939
UniProt:
A0AAE6RNM1
LinkDB
All DBs
Position
1019188..1020924
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AA seq
578 aa
AA seq
DB search
MVRRRARERPDRVSLLDGLDQGQRQAAEALLGPVCVLAGAGTGKTRTITHRIAHGVETGV
YTPARVMALTFTSRAAAQLRSRLRVLGAGSVQARTFHAAALSQLGYFWPQLVGGTMPTLL
DGKARLLAHAAERLRLRLDTATLRDLSAEIEWRKVSALSLEQYAVAARTRALPGRLTLEQ
TVALVDEYEGLKDQRRQIDFEDVLLVTAGMLESEPAMAMQVREQYRFFVVDEYQDVSPLQ
QRLLELWLGDRSDLCVVGDASQTIYSFAGARADYLLDFPARWPAATVVRLEENYRSAVPI
VQTANRLMRGRPGALSLHAVAAVEAPEPAIDAYPDDIAEARGVAERVAADVDAGVRPSDI
AVLFRTNSQSAMIEHALHERGVSAHVRGGKRFFDLPEVKQAVMQLRAASVSIGGEPLFKS
VSDVLRSLGWSAEPPSAPGAVRDRWESLDTLARLVDEAPADWSFRRFTDDLIARQQGHHE
PDRAAVTLATLHSAKGLEWESVHLMGLAEGLLPISYANGLEAVDEERRLLYVGITRARRR
LRLSWARSTVGRVTRREPSRFLEELGTRSRGAVPAPAS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
ctggtacggaggcgagctcgagaacggcccgatcgcgtgagcctgctcgacggcctcgac
cagggtcagcgccaggcggcggaggctctgctgggccccgtctgcgtcctcgccggagcc
ggcaccggcaagacccgcaccatcacgcaccgcatcgcgcacggagtcgagaccggcgtc
tacacgcccgcccgcgtcatggcgctcaccttcaccagtcgtgcggcggcccaactgcgc
tcgcgcttgcgggtgctcggtgccggcagcgtgcaggcccgcaccttccacgccgccgcg
ctctcgcagctcggctacttctggccccagctggtcggcggcacgatgccgacgctgctc
gacggcaaggcgcgcctgctcgcgcacgcggccgagcgcctccgcctgaggctcgacacg
gcgaccctgcgcgatctgtcggccgagatcgagtggcggaaggtctcggcgctctccctc
gagcagtacgcggtcgccgctcggacccgtgcgctcccggggaggctcaccctcgagcag
accgtcgcgctcgtcgacgagtacgagggcctgaaggaccagcggcgccagatcgacttc
gaggacgtcctgctcgtgaccgcgggcatgctcgagtcggagccggcgatggcgatgcag
gtgcgcgagcagtaccgcttcttcgtcgtcgacgagtaccaggacgtctccccgctacag
cagcgcctcctcgagctctggctcggagaccggagcgatctctgcgtcgtgggggacgcg
agccagaccatctactctttcgccggagcgcgcgccgactacctcctcgacttcccggcg
cgctggcccgccgcgacggtcgtgcgcctggaggagaactaccgctccgccgtgccgatc
gtgcagaccgcgaaccgcctgatgcgcggacgtcccggtgcgctctcgctgcacgcggtc
gcggcggtggaggcgccggagccggcgatcgacgcctacccggacgacatcgccgaggcc
aggggagtcgccgagcgggtcgccgccgacgtcgacgcgggagtgcgcccctctgacatc
gcggtgctgttccgcaccaacagccagtccgcgatgatcgagcacgccctgcacgagcgc
ggggtgagcgcccacgtgcgaggcggcaagcgcttcttcgacctgcccgaggtgaagcag
gccgtcatgcagctgcgcgccgcgtccgtctcgatcggcggcgagccgctgttcaagtcg
gtgagcgacgtgctccgctcactcggctggagcgccgagccgccgtcggccccgggcgcc
gtgcgcgaccgctgggagtcgttggacaccctggcccgcctcgtcgacgaggcgccggcc
gactggagcttccgccggttcaccgacgacctcatcgcccggcagcagggccaccacgag
ccggatcgggcggccgtgaccctcgccaccctgcactcggccaagggcctcgagtgggag
tcggtgcacctgatgggtctcgccgagggcctgctgcccatctcctacgcgaacgggctc
gaggccgtcgatgaggagcggcggctcctgtacgtcggcatcacccgcgcgcggcggcga
ctccggctctcgtgggcgcgctcgacggtcggccgcgtcactcggagggaaccgtcgcgg
ttcctcgaagagctcggcacgcgcagtcggggtgcggttcctgctcccgcgtcttga
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