Rathayibacter tanaceti: GSU10_05645
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Entry
GSU10_05645 CDS
T06377
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rte
Rathayibacter tanaceti
Pathway
rte00300
Lysine biosynthesis
rte00470
D-Amino acid metabolism
rte01100
Metabolic pathways
rte01110
Biosynthesis of secondary metabolites
rte01120
Microbial metabolism in diverse environments
rte01230
Biosynthesis of amino acids
Module
rte_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GSU10_05645
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GSU10_05645
Enzymes [BR:
rte01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GSU10_05645
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Motif
Pfam:
DAP_epimerase
Chap-C
Motif
Other DBs
NCBI-ProteinID:
QHC55169
UniProt:
A0A166IMD2
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Position
1192416..1193297
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AA seq
293 aa
AA seq
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MTIELHFTKGQGTGNDFVLYSDPDGEVELSPAQVAMICDRHFGVGADGVIRAVRSRALPE
GAVALAEESEAEWFMDYRNADGSVAEMCGNGIRVYAAFLLAGGLASLEPGDTLPIGTRAG
VRDVTRSGAGFQVDLGRWQLAGGEPLVRAKELKVARPGLGIDLGNPHVVVALSNDEELDS
ADLTYIPQLEPEPADGANIEFVVPGEPLVHDGIGRIRMRVHERGSGETLSCGTGAAAAAL
AVRYWAGARAPQSWRVEVPGGVLGVSMFATEEGEHVGLSGPAELVFTGTIRID
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgagctgcacttcaccaagggccagggcaccggcaacgacttcgtgctctac
agcgaccccgacggtgaggtcgagctctcgcccgcgcaggtcgcgatgatctgcgaccgc
catttcggcgtcggcgccgacggagtgatccgggccgtccgctcgcgagcactgcccgag
ggggccgtcgcgctcgcggaggagagcgaggcggagtggttcatggactaccggaacgcc
gacggatcggtcgccgagatgtgcggcaacggcatccgcgtgtacgccgccttcctcctc
gccggtggtctcgcctccctcgaacccggcgacactctgcccatcggcacccgtgccggg
gtccgcgatgtgacccgcagtggcgccggcttccaggtcgacctgggacgctggcagctc
gccggtggcgagccgctcgtccgggcgaaggagctgaaggtcgcgcgtccgggtctcggg
atcgacctcggcaaccctcacgtcgtcgtggcgctgagcaacgacgaggaactcgactcg
gccgacctcacctacatcccgcagctcgagcccgagccggccgacggcgccaacatcgag
ttcgtggtgccgggtgagcccctcgtgcacgacggcatcggccgcatccgcatgcgggtg
cacgagcgcggcagcggcgagacgctgagctgcggcaccggtgcggccgcggcggccctg
gccgtgcgctactgggcaggggcccgtgcgcctcagtcctggcgcgtcgaggtgccgggc
ggcgtgctgggcgtcagcatgttcgccaccgaggagggcgagcacgtcggcctctccggc
ccggccgagctcgtcttcaccggcaccatccgcatcgactga
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