KEGG   Rathayibacter tanaceti: GSU10_06310
Entry
GSU10_06310       CDS       T06377                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rte  Rathayibacter tanaceti
Pathway
rte00061  Fatty acid biosynthesis
rte00071  Fatty acid degradation
rte01100  Metabolic pathways
rte01212  Fatty acid metabolism
rte02024  Quorum sensing
rte04146  Peroxisome
Module
rte_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rte00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    GSU10_06310
   00071 Fatty acid degradation
    GSU10_06310
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    GSU10_06310
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GSU10_06310
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rte01004]
    GSU10_06310
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rte04147]
    GSU10_06310
Enzymes [BR:rte01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     GSU10_06310
Lipid biosynthesis proteins [BR:rte01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   GSU10_06310
Exosome [BR:rte04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   GSU10_06310
  Exosomal proteins of breast cancer cells
   GSU10_06310
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: QHC55282
UniProt: A0A168G7W7
LinkDB
Position
complement(1339478..1341301)
AA seq 607 aa
MNQFDSPRVVAADPQANTTALLLDRVRETPDRPLFALPDGAGWRDVTAQEFLDQVTALAK
GFVAVGLEPGEKIGLICKTRYEWTLIDFAVWFAGGVLVPVYETSSPAQVQWNLADSGAHA
VIVETPEHFARFDEVRADLPDVRIAWQIGLGDLDKLVARGAEVPDAEIERRRSLATGADI
ATIIYTSGSTGRPKGCIIRHSNFVELSRNSAVAITELIHQPGASTLLFITTAHVFARFIA
ILCVHGGVKVGHQADTKQLLPSLASFKPTFLLAVPRVFEKVYNSAEQKAESGGRGKIFRR
AADVAVAHSMAVEAGSVPLALKLQFLLFDRLVYSKLRTAMGGNVRFAVSGSAPLGDRLGH
FFHSLGIKILEGYGLSETTAPATVNRTERFKIGTVGPALPGVSIRIAADGEIQVRGIDIF
GGYWNNEKATAEAFDGEWFRTGDLGTLDDEGYLRVTGRTKEIIVTAGGKNVAPAALEDPI
RSTPLVGQVVVVGDQRPFIAALVTLDSEMLPTWLANNGQDASLSLEDAAVNPAVLAEVQR
AVDAANDRVSRAESIRKFVVLPIEFTEASGHLTPKMSIKRNVILADFADTISAVYSAAPA
TEGISLR
NT seq 1824 nt   +upstreamnt  +downstreamnt
gtgaaccagttcgattcaccccgggtggtggcggccgatccgcaggccaacacgacggcc
ctcctcctcgaccgcgtacgcgagacgcccgatcgcccgctcttcgcgctgccggacggc
gcgggctggcgcgacgtgacggcgcaggagttcctcgaccaggtcaccgcgctcgccaag
ggcttcgtcgccgtcggcctcgagccgggcgagaagatcggtctgatctgcaagacccgc
tacgaatggaccttgatcgacttcgcggtctggttcgccggcggcgtcctcgtccccgtc
tacgagacgtcctcccccgcccaggtgcagtggaacctcgccgactccggcgcccacgcc
gtcatcgtcgagacgccggagcacttcgcccgcttcgacgaggtgcgcgccgatctgccg
gacgtacgcatcgcctggcagatcggcctgggcgacctggacaagctcgtcgcccgcgga
gccgaggtcccggacgccgagatcgagcgtcgccgctccctcgccaccggcgccgacatc
gcgacgatcatctacacctccggctcgaccggccggcccaagggctgcatcatccgccac
tccaacttcgtcgagctcagccgcaactccgcggtcgccatcaccgagctgatccatcag
ccgggcgcgtcgacactgttgttcatcacgacggcgcatgtgttcgctcgcttcatcgcg
atcctctgcgtgcacggcggggtgaaggtgggacaccaggccgacaccaagcagctgctc
ccctccctcgcctcgttcaagccgacgttcctgctcgcggtgccgcgcgtgttcgagaag
gtctacaactcggccgagcagaaggcggaaagcggcgggcgcgggaagatcttccgccgc
gccgccgacgtcgcggttgcgcactcgatggccgtcgaggcgggctcggtgcctctcgcg
ctgaagctgcagttcctcctcttcgaccggctcgtgtactcgaagctgcgcacggcgatg
ggcggcaacgtgcgcttcgccgtctcgggatccgcgccgctgggcgaccggctgggtcac
ttcttccacagtctcggcatcaagatcctcgagggctacgggctcagcgagaccacggcg
ccggcgaccgtcaaccggacggagcggttcaagatcggaacggtcggtccggcactgccc
ggcgtctcgatccggatcgccgcagacggcgagatccaggtccgcggcatcgacatcttc
ggcgggtactggaacaacgagaaggcgacggcggaggcgttcgacggcgagtggttccgc
acaggcgacctcggcactctggatgacgagggctacctccgcgtcacgggccgcacaaaa
gagatcatcgtcacggccggcggcaagaacgtcgctccggccgcgctcgaggatccgatc
cgctccactccgctcgtcggccaggtcgtcgtcgtcggcgaccagcggcccttcatcgcc
gcgctggtgaccctcgactcggagatgctgccgacctggctcgcgaacaacggtcaggac
gcctcgctctcgctcgaggacgcggccgtgaacccggccgtgctcgccgaggtgcaacgc
gccgtggacgccgcgaacgaccgcgtctcgcgcgcggagtcgatccgcaagttcgtggtc
ctgccgatcgagttcaccgaggcgagcggccatctcacccccaagatgagcatcaagcgg
aacgtcatcctcgctgacttcgccgacaccatcagcgccgtgtactccgccgcccccgcg
accgagggaatctccctgcgctga

DBGET integrated database retrieval system