Rathayibacter tanaceti: GSU10_06445
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Entry
GSU10_06445 CDS
T06377
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rte
Rathayibacter tanaceti
Pathway
rte03030
DNA replication
rte03430
Mismatch repair
rte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSU10_06445 (dnaE)
03430 Mismatch repair
GSU10_06445 (dnaE)
03440 Homologous recombination
GSU10_06445 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rte03032
]
GSU10_06445 (dnaE)
03400 DNA repair and recombination proteins [BR:
rte03400
]
GSU10_06445 (dnaE)
Enzymes [BR:
rte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSU10_06445 (dnaE)
DNA replication proteins [BR:
rte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GSU10_06445 (dnaE)
DNA repair and recombination proteins [BR:
rte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GSU10_06445 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
QHC55306
UniProt:
A0A162F7H9
LinkDB
All DBs
Position
1369029..1372541
Genome browser
AA seq
1170 aa
AA seq
DB search
MPSNDSFVHLHVHSEYSMLDGAARVKPLIDAAVEEGMPAIAVTDHGNVFGAFDFWRTATA
AGIKPIIGTEAYLTPGTHRTDKTRIRWGDGGGDDVSGSGAYTHMTLLSSTTTGMHNLFRL
SSKASIEGYYFKPRMDREILSQYSEGLIGTTGCPSGEVQTRLRLGQYREARQAAADYRDI
FGKENFFAEIMDHGLDIERRVIADVIRLAKDLDLPLVATNDLHYTHAHDATSHAALLCVQ
SGTTLDDPKRFKFDADEFYLKSPREMRQVFRDHPEACDNTLLIAERCDVQFDTSANYMPR
FPVPEGETEDTWFTKEVEAGLRERYPGGITQEVRERADYEMGVIRQMGFSGYFLVVADFI
NWSKRNGIRVGPGRGSGAGSMAAYAMRITDLDPLHHGLIFERFLNPDRVSMPDFDVDFDD
RRRGEVIRYVTEKYGDERVAQIVTYGTIKAKQALKDASRVLGFPFGMGEKLTKAMPPAIM
GKDIPLSGINDPAHGRYKEAVDVRNVIAEDPQAKLVFDTALGLENLKRQWGVHAAGVIMS
SDPLLDIIPIMKREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTIIDDALDNIRANREQ
DLVLEDLSLDDQAAYDLLARGDTLGVFQLDGGPMRGLLRLMKPDNFEDISAVLALYRPGP
MGADSHTNYALRKNGVQQITPIHPELEEPLAEVLGGTYGLIVYQEQVMSIAQKLAGFTLA
QADLLRRAMGKKKKSELDKQFEGFSGGMTANGYSMEAVKTLWDILLPFSDYAFNKAHSAA
YGVVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMAAYLNECRRMGIKVLPPDVNESIGFF
TAVGTDIRFGLGAVRNVGTNVVEGIRAAREEKGRFESFHDFLRKVPLQVTNKRTVESLIK
AGAFDSLGPTRRALVEVHEDAVEAAVGEKRNEANGQVGFDFDSLWDEPQAAVQVPERPEW
AKRDKLAFERDMLGLYVSDHPLAGLETELAKHYSTTIADLLISETVADGETVVVAGLVTS
VQHRMAKTSGNQYGMIQVEDFGGEITCMFMGKAYQEFAPALTNDSIVVVRGRVSMRDDGM
NLHAFSLFAPELSQDGDSGPLTVSMPESRATTDTVSQLSDVLIRHSGQTEVRLKLIKGDT
ARIFEVPFPVRITPDLFGELKSLLGPNCLY
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
ttgccgagtaacgattccttcgtccacctgcacgtgcacagcgagtactcgatgctcgac
ggcgccgcccgggtgaagccgctgatcgatgcggcggtcgaggagggcatgccggcgatc
gccgtgaccgaccacggcaacgtgttcggcgccttcgacttctggcgcacggcgaccgcg
gcagggatcaagccgatcatcggcaccgaggcctacctcactcctggcacgcaccgcacc
gacaagacgcgcatccgctggggcgacggcggaggggacgacgtgtccggttccggcgcc
tatacccacatgacgctgctgagctcgaccacgaccggcatgcacaatctcttccgcctc
tcgtcgaaggcgtcgatcgagggctactacttcaaaccgcggatggaccgcgagatcctc
tcgcagtactccgaggggctgatcggcaccaccggctgcccgagtggcgaggtgcagacc
cgcctccggctggggcagtacagggaggcgcggcaggcggccgccgactaccgcgacatc
ttcggcaaggagaacttcttcgccgagatcatggaccacgggctcgacatcgagcggcgc
gtcatcgcggacgtgatccgactcgccaaagacctcgacctgccgctcgtcgcgaccaac
gacctgcactacacgcacgcccacgacgccacgtcgcacgcggcgctgctctgcgtgcag
tcgggcaccactctcgacgaccccaagcgattcaagttcgacgcggacgagttctacctc
aagtctccgcgggagatgcgccaggtgttccgcgaccaccccgaggcctgcgacaacacg
ctgctgatcgccgagcgctgcgacgtgcagttcgacacctccgcgaactacatgccccgc
ttccccgtgccggagggcgagacggaggacacctggttcaccaaggaggtcgaggcgggc
ttgcgcgagcggtaccccggcgggatcacccaggaggtccgcgagcgcgcggactacgag
atgggcgtcatccgccagatgggcttctcggggtactttctcgtcgtcgccgacttcatc
aactggtccaagcgcaacgggatccgcgtcggaccgggtcgcggctccggtgccggctcg
atggccgcctacgcgatgcggatcaccgacctggatccgctgcaccacggactgatcttc
gagcgcttcctcaaccccgaccgcgtctcgatgcccgacttcgacgtcgacttcgacgac
cgtcgccgcggcgaggtgatccgctacgtcacagagaaatacggcgacgagcgtgtcgcg
cagatcgtcacctacggcacgatcaaggcgaagcaggcgctcaaggacgcctcgcgcgtg
ctcggcttccccttcgggatgggcgagaagctcaccaaggcgatgccgcccgcgatcatg
ggcaaggacatcccgctcagcggaatcaacgatcccgcacacggccgctacaaggaggcg
gtggacgtccggaacgtcatcgccgaggacccgcaggccaagctcgtcttcgacaccgcg
ctcggtctcgagaacctcaagcgccagtggggcgtgcacgcggccggcgtcatcatgtca
agcgatccgctgctcgacatcatcccgatcatgaagcgggagcaggacggccagatcgtc
acgcagttcgactaccccgcctgcgagtccctcggcctgatcaagatggacttcctgggg
ttgcggaacctcacgatcatcgacgacgcgctcgacaacatccgcgcgaaccgcgagcag
gatctcgtgctcgaagacctctcgctcgacgaccaagccgcctacgacctgctcgcccgg
ggggacacgctcggcgtcttccagctcgacggcggcccgatgcgcggtctgctgcgcctg
atgaagccggacaacttcgaggacatctccgcggtgctcgcgctctaccggccgggcccg
atgggcgccgactcccacaccaactatgcgctgcgcaagaacggcgtgcagcagatcact
ccgatccatccggagctcgaggagccgctcgcggaggtgctcggcgggacctacggcctg
atcgtgtaccaggagcaggtcatgtcgatcgcgcagaagctcgcggggttcacgctcgcg
caggccgacctcctgcggcgcgcgatgggcaagaagaagaagtccgagctggacaagcag
ttcgagggtttctcgggcgggatgaccgccaacggctactcgatggaggccgtcaagacg
ctctgggacatcctcctgcccttctccgactacgccttcaacaaggcgcactcggccgcc
tacggagtcgtctcgtactggacggcctacctcaaggcgcactaccccgcggagtacatg
gcggcgcttctcacgagcgtcggcgactccaaggacaagatggccgcctacctcaacgag
tgccggcgcatgggaatcaaggtgctcccgccggacgtcaacgagtcgatcggcttcttc
accgcggtcggcaccgacatccgcttcggcctgggtgccgtgcgcaacgtcgggacgaac
gtggtcgagggcatccgcgcggcgcgcgaggagaaggggcgcttcgagtcgttccacgat
ttcctccgcaaagtgccgctgcaggtgacgaacaagcgcacggtcgagtccctgatcaag
gccggagccttcgactcgctcgggcccacccgtcgcgcactcgtggaggtgcacgaggac
gcggtcgaggcagcggtcggcgagaagcgcaacgaggccaacggccaggtgggcttcgac
ttcgacagtctctgggacgaaccgcaggccgccgtccaggtgccggagagacccgagtgg
gccaagcgcgacaagctcgccttcgagcgcgacatgctgggcctctacgtgtccgaccat
ccactcgccgggctcgagaccgaactggccaagcactacagcaccacgatcgccgacctg
ctcatctccgagaccgtcgccgacggcgaaaccgtggtcgtcgccgggctcgtcacgagc
gtgcagcaccggatggcgaagacctcgggcaaccagtacgggatgatccaggtcgaggac
ttcggcggcgagatcacctgcatgttcatgggcaaggcgtaccaggagttcgcccccgcc
ctcaccaacgactcgatcgtggtggtccggggccgcgtgagcatgcgcgacgacgggatg
aacctgcacgcgttcagcctcttcgcccccgagctgagccaggacggcgactccggcccg
ctcaccgtctcgatgccggaatcgcgcgcgacgaccgacaccgtctcacagctcagcgac
gtgctcatccggcactccgggcagacggaggtacggctgaagctgatcaagggcgacacg
gcccgtatcttcgaggtgccgttcccggtgcggatcacccccgacctcttcggcgagctg
aagagcctgctgggccccaactgtctgtattga
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