Rathayibacter tanaceti: GSU10_07095
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Entry
GSU10_07095 CDS
T06377
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rte
Rathayibacter tanaceti
Pathway
rte03030
DNA replication
rte03410
Base excision repair
rte03420
Nucleotide excision repair
rte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSU10_07095 (polA)
03410 Base excision repair
GSU10_07095 (polA)
03420 Nucleotide excision repair
GSU10_07095 (polA)
03440 Homologous recombination
GSU10_07095 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rte03032
]
GSU10_07095 (polA)
03400 DNA repair and recombination proteins [BR:
rte03400
]
GSU10_07095 (polA)
Enzymes [BR:
rte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSU10_07095 (polA)
DNA replication proteins [BR:
rte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GSU10_07095 (polA)
DNA repair and recombination proteins [BR:
rte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GSU10_07095 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSU10_07095 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QHC55423
UniProt:
A0AAE6RKJ6
LinkDB
All DBs
Position
1500989..1503658
Genome browser
AA seq
889 aa
AA seq
DB search
MSDPEQPTLLLVDGHSLAFRAFYALPVDSFQTRDGQHTNAIHGFLSMLILLLKNEKPTHL
GVAFDISRYSFRTREYPEYKGTRGETPPEFKGQVPLLEEALHAMNIRTVSKEDFEADDIL
ATLARQGAEAGFRVLVVSGDRDTIQLVTPEVTLLYPSTQGVSQLTRYDRDKVFEKYGVEP
HQYPEIAALVGETSDNLPGVDKVGPKTAAKWVNQYGTVADIIAHANEIKGVVGEKLREQK
ENALRNRRLNRLITDVELPLGPVDLARRPIDPEAVREIFSRLEFKTLQERVLTIAAEEGV
DGAAAALAGDVVTTTAPAVRTLVDEELAHWLDRVSAQGTAPVAVQVQLGADGLEGVGLAV
ERETAFVPWAAERPDYTALEEWLAGRAPKYFADAKPQIKALRRAGLPVAGLAFDTRVASW
LLQPSGHPATLAAQVAQHLDETMAQGDPDQLVPAVEPMGPATEAWYAYRLVGALTERLGE
GMLSVLVDIELPIVQVLATMELTGVAIDAEVLARLRGELTLTAAELASRAFAEIGHEMNL
GSPKQLQQVLFGELDMPRTRATKTGYTTDASALADLQESHSQPYLGLLLEHRDATKLKQI
IETLEKSVTADRRIHTSYDQTGTATGRISSNDPNLQNIPVRSDVGRRIRTAFVHSAEAST
LLTADYSQIEMRIMAHLSRDAGLIEAFQSGEDLHRFVGARIFGVEPGDVTSAMRNKVKAM
SYGLAYGLSAFGLSKQLRISSAEAKQLMTDYFVRFGAVRDYLRSVVEQARETGYTETIFG
RRRPFPDLQSTNRVLRDNAERAALNSPIQGSAADIMKRAMIGVQSDLQQRELGSRMLLQV
HDELIFDVAPGEESVLEEIVRARMAGAADLSVPLEVQVGHGADWDVAAH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagatccggaacagcctaccctcctgctcgtcgacggccattccttggcgttccgg
gccttctatgcgctcccggtcgacagcttccagacccgcgacggccagcacacgaacgcc
atccacggcttcctgtcgatgctgattctgctgctgaagaacgagaagcccacccacctc
ggcgtcgcgttcgacatctcgcggtactcgttccgcacccgcgagtaccccgagtacaag
ggcacccgcggcgagaccccgcccgagttcaagggccaggtccccctcctcgaggaggcg
ctgcacgcgatgaacatccgcaccgtctcgaaggaggacttcgaggccgacgacatcctc
gccaccctcgcccgtcagggggccgaggccggcttccgcgtgctcgtcgtctcgggcgac
cgcgacaccatccagctggtcacccccgaggtcacgttgctctacccctccacgcagggc
gtctcgcagctcacgcgctacgaccgcgacaaggtgttcgagaagtacggcgtcgaaccg
catcagtaccccgagatcgccgcgctcgtcggcgagacgagcgacaacctgcccggagtc
gacaaggtcggtccgaagactgcggcgaagtgggtgaaccaatacggcacggttgccgac
atcatcgcgcacgcgaacgagatcaagggtgtcgtcggcgagaagctgcgcgagcagaag
gagaacgccctccgcaaccgccggctcaaccgcctcatcaccgatgtcgagctgccgctg
ggccccgtcgacctcgctcgccgccccatcgatcccgaagccgtccgcgagatcttcagc
cgcctcgagttcaagaccctgcaggagcgggtgctcaccatcgccgccgaggagggcgtc
gacggcgcagccgccgctctcgccggcgacgtcgtgacgacgaccgcccccgcggtgcgc
acgctggtcgacgaggagctcgcgcactggctcgaccgggtgtccgcgcagggaacggcg
cccgtcgccgtgcaggtgcagctgggggcggatggactcgagggagtgggcctcgccgtc
gagagggagaccgccttcgtgccctgggcggccgagcggcctgactacaccgcactcgag
gagtggcttgcgggccgcgcgcccaagtacttcgccgacgccaagccgcagatcaaggcg
ctccgccgggcgggactgccggtcgcgggcctggccttcgacacccgggtcgcctcctgg
ctgctgcagccttccgggcacccggcgaccctggccgcgcaggtcgcgcaacacctcgac
gaaaccatggctcagggagacccggaccagctcgtccccgcggtcgagccgatgggtccg
gccaccgaggcctggtacgcgtaccggctcgtgggcgcgctcacggagcggctcggcgag
gggatgctgtcggtgctggtcgacatcgagctgccgatcgtgcaggtcctcgcgacgatg
gagctcacgggggtcgcgatcgacgccgaggtcctcgcacgcctccgcggcgagctgacg
ctcaccgccgccgagctcgcgagtcgggccttcgccgagatcgggcatgagatgaacctc
ggctcgcccaagcagctccagcaggtgctgttcggtgaactcgacatgcctcggacccgc
gcgacaaagaccggctacacgaccgacgcctccgccctcgccgatctgcaagagtcgcac
tcccagccctacctcggcctgctgctcgagcaccgcgacgcgacgaagctcaagcagatc
atcgagacgctcgagaagtcggtcaccgccgaccgccggatccacaccagctacgaccag
accggcacggccacgggccgcatctcgtcgaacgacccgaacctccagaacatcccggtc
cgcagcgacgtgggtcgtcgcatccgcaccgctttcgtgcacagcgccgaggcgagcact
ctgctcacggccgactactcgcagatcgagatgcggatcatggcgcatctgtcgcgcgat
gccggattgatcgaagcgttccagagcggcgaggacctgcaccgcttcgtcggtgcccgc
atcttcggtgtcgagccgggcgacgtcacctcggccatgcgcaacaaggtcaaggcgatg
tcctacggcctcgcctacggtctgagcgcgttcggcctctcgaagcagctccggatctcg
agcgccgaggcgaaacagctgatgaccgactacttcgtccgcttcggcgccgtccgcgac
tacctccgcagcgtggtcgagcaggctcgtgagaccggctacaccgagaccatctttgga
cgccgtcgacccttccccgacctccagagcacgaaccgcgtcctccgcgacaacgcggag
cgagccgctctcaactcgcccatccagggctcggcggccgacatcatgaagcgcgcgatg
atcggcgtgcagtccgatctccagcagcgcgagctgggctcgcggatgctgctccaggtg
cacgacgagctcatcttcgacgttgctcccggcgaggagtcggttctcgaggagatcgtg
cgcgcacggatggcgggcgccgccgatctgagcgtgccgctcgaggtccaggtcggtcac
ggagcggactgggacgtcgcagcgcactga
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