Rathayibacter tanaceti: GSU10_07680
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Entry
GSU10_07680 CDS
T06377
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
rte
Rathayibacter tanaceti
Pathway
rte02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GSU10_07680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rte03021
]
GSU10_07680
Transcription machinery [BR:
rte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GSU10_07680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QHC55532
UniProt:
A0A168G8Q2
LinkDB
All DBs
Position
complement(1634076..1635383)
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AA seq
435 aa
AA seq
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MATRATKTATLDAVDDDVTTTAKKPAGRKPAAKTTVAKTAAAKTTRSRATTKAAAVTEDE
PTDAVEPDEADVDEETEVVVEDTEAAKDDTETPEVPAAAAAVAPAEPLPSGALVLSFGGE
DDEVPVYSTAITGATADPVKDYLKQIGKVALLNAAEEVELAMRIEAGLFAEDKLANSSDL
SPELVRELRWVAKDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVE
KFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGRE
PTPEELSRELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGF
TMLQKQLESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVTRERIRQIESKTMAK
LRHPSRSQSLRDYLE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagagctaccaagacagcaacgctcgacgccgtcgacgacgacgtgacgacg
accgccaagaagcccgcagggcgcaagcccgcggccaagaccacggtggcgaagaccgcc
gcagcgaagaccacgcgatcgcgcgccaccaccaaggccgccgcggtcaccgaggacgag
ccgaccgatgcggtcgagcccgatgaggcggacgtcgacgaggagaccgaggtcgtcgtc
gaggacaccgaggcggcgaaggacgacacggagacgccggaggttcccgctgctgctgcg
gccgtcgcacccgcggagccgctgccgagcggtgcgctggtcctctccttcgggggcgag
gacgacgaggtcccggtctactcgaccgcgatcaccggcgccaccgccgatccggtcaag
gactacctgaagcagatcggcaaggtcgcgctcctcaacgcggctgaggaggtcgagctc
gcgatgcgcatcgaggccggcctgttcgccgaggacaagctcgccaactcgagcgacctc
agcccggaactcgtgcgcgagctgcgctgggtcgcgaaggacgggcagcgagccaagagc
cacctgctcggagcgaacctccggctcgtggtcagccttgccaagcgctacacgggtcgc
ggcatgcagttcctcgacctcatccaggagggcaacctgggcctgatccgtgcggtcgag
aagttcgactacaccaagggcttcaagttctcgacctacgcgacgtggtggatccgccag
gcgatcactcgcgcaatggccgaccaggcccgcacgatccgcatccccgtgcacatggtc
gaggtcatcaacaagctcgcccgcgtgcagcgtcagatgctgcaagacctgggccgcgag
cccacgcccgaggagctctcccgcgagctcgacatgacccccgagaaggtcatcgaggtg
cagaagtacggccgtgagccgatctcgctgcacacccccctgggcgaagacggcgacagc
gagttcggtgacctgatcgaggacaccgaggcggtcgtcccggccgacgccgtcggcttc
accatgctgcagaagcagctggagtcgctgctcgactccctctcggagcgcgaggccggc
gtgatccgcatgcgcttcggcctgggcgacggtatgccgaagacactggaccagatcggc
gacaccttcggcgtcacgcgcgagcggatccgccagatcgagtccaagacgatggcgaag
ctccgccacccgtcccgatcgcagtcgctgcgcgactacctcgagtag
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