KEGG   Rathayibacter tanaceti: GSU10_07680
Entry
GSU10_07680       CDS       T06377                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
rte  Rathayibacter tanaceti
Pathway
rte02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:rte00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    GSU10_07680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rte03021]
    GSU10_07680
Transcription machinery [BR:rte03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GSU10_07680
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: QHC55532
UniProt: A0A168G8Q2
LinkDB
Position
complement(1634076..1635383)
AA seq 435 aa
MATRATKTATLDAVDDDVTTTAKKPAGRKPAAKTTVAKTAAAKTTRSRATTKAAAVTEDE
PTDAVEPDEADVDEETEVVVEDTEAAKDDTETPEVPAAAAAVAPAEPLPSGALVLSFGGE
DDEVPVYSTAITGATADPVKDYLKQIGKVALLNAAEEVELAMRIEAGLFAEDKLANSSDL
SPELVRELRWVAKDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVE
KFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGRE
PTPEELSRELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGF
TMLQKQLESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVTRERIRQIESKTMAK
LRHPSRSQSLRDYLE
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggccaccagagctaccaagacagcaacgctcgacgccgtcgacgacgacgtgacgacg
accgccaagaagcccgcagggcgcaagcccgcggccaagaccacggtggcgaagaccgcc
gcagcgaagaccacgcgatcgcgcgccaccaccaaggccgccgcggtcaccgaggacgag
ccgaccgatgcggtcgagcccgatgaggcggacgtcgacgaggagaccgaggtcgtcgtc
gaggacaccgaggcggcgaaggacgacacggagacgccggaggttcccgctgctgctgcg
gccgtcgcacccgcggagccgctgccgagcggtgcgctggtcctctccttcgggggcgag
gacgacgaggtcccggtctactcgaccgcgatcaccggcgccaccgccgatccggtcaag
gactacctgaagcagatcggcaaggtcgcgctcctcaacgcggctgaggaggtcgagctc
gcgatgcgcatcgaggccggcctgttcgccgaggacaagctcgccaactcgagcgacctc
agcccggaactcgtgcgcgagctgcgctgggtcgcgaaggacgggcagcgagccaagagc
cacctgctcggagcgaacctccggctcgtggtcagccttgccaagcgctacacgggtcgc
ggcatgcagttcctcgacctcatccaggagggcaacctgggcctgatccgtgcggtcgag
aagttcgactacaccaagggcttcaagttctcgacctacgcgacgtggtggatccgccag
gcgatcactcgcgcaatggccgaccaggcccgcacgatccgcatccccgtgcacatggtc
gaggtcatcaacaagctcgcccgcgtgcagcgtcagatgctgcaagacctgggccgcgag
cccacgcccgaggagctctcccgcgagctcgacatgacccccgagaaggtcatcgaggtg
cagaagtacggccgtgagccgatctcgctgcacacccccctgggcgaagacggcgacagc
gagttcggtgacctgatcgaggacaccgaggcggtcgtcccggccgacgccgtcggcttc
accatgctgcagaagcagctggagtcgctgctcgactccctctcggagcgcgaggccggc
gtgatccgcatgcgcttcggcctgggcgacggtatgccgaagacactggaccagatcggc
gacaccttcggcgtcacgcgcgagcggatccgccagatcgagtccaagacgatggcgaag
ctccgccacccgtcccgatcgcagtcgctgcgcgactacctcgagtag

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