Rathayibacter tanaceti: GSU10_08380
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Entry
GSU10_08380 CDS
T06377
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
rte
Rathayibacter tanaceti
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rte03036
]
GSU10_08380 (smc)
Chromosome and associated proteins [BR:
rte03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
GSU10_08380 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
AAA_27
Motif
Other DBs
NCBI-ProteinID:
QHC55646
UniProt:
A0AAE6RKE0
LinkDB
All DBs
Position
complement(1780318..1783830)
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AA seq
1170 aa
AA seq
DB search
MYLKSLTLKGFKSFAQPTTFAFEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK
MEDVIFAGTSTRGPLGRAEVALTIDNSDGALPIEYTEVTITRTLFRNGGSEYAINGRGCR
LLDVQELLSDSGLGREMHVIVGQGQLDAVLRATPEERRGFIEEAAGILKHRRRKEKTLRK
LEAMQANLTRLSDLAGEIRRQLKPLGRQAEVARQAQTIAAVVRDARARLLADDVVALRAA
LDGFARSESERHSERVLLQERLEQVTLRLARLEAEAVGDAVDDARRTAFELESVQERLRN
LSALAGQRLAMLEIEADQPQIQPRVTPQQIEEAGVELERLRQAVLDAEAGWVDAQRATVA
ARTALDATDDEIAAQSARVSRYDLELSSFGGQADTAASRLASVRGEVLRAQNTLDSAGQR
RDAARQALDALEDEIGEAGRGADGTLDEGYELAQSAVVQAEAEIGRLREELHALERDREA
LAARSGALSLALDVSDGSAELVAARLDGVLGRVAERIQVRPGFEAAVAAALGAIADAVAV
ESFAQAEAALGEAVDRELGRVELLVAGARRPPVDLPVPEGALRAVELVTAPPGVLALLET
VVVVEDLATARRLLPGLTGGAVPVTVVTRDGATVSDILLSAGSGGQRSRIELVSERDSAA
TRLEEVERLLDRLRFEVAEQNGALRAAKEQSTLALSALREHDAARAAHTERLGRVRAQLE
AATAEHGRGEKALAIASERVGDAERASQRAREALDEARARPRPVLDVSARDGLQRGVDAA
REREIEARLGVETAKERVQAEQSRGESLARRLADERAAAEEAARRAVVRRRQREAAAEVS
AALPAVLASVERSVQEARDELVTAEAARSQQNEELRTLRREEATLRERLQSVTESVHGLE
LQISEKRLQLTGLLERAGSELGLTEDVLVEEYGPEVGVPDETDEQQEPRRYVREEQRRRL
EKAERQLGQLGRVNPLALEEFAALEQRHVFLTEQLADLTSTRRDLLTIIEELDETMQSVF
ASAFEDTQAAFADVFPVLFPGGTGSISLTDPENLLTTGIEVAVRPAGKKIERLSLLSGGE
RSLAAVAFMVAIFTSRPSPFYIMDEVEAALDDANLGRLLSIFEDLRTSSQLIVITHQKRT
MEIADALYGVSMRQDGVSAVVGQRVQAPPA
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctgaagagcctgaccctcaaggggttcaagtccttcgctcagccgaccacgttc
gccttcgagccgggcgtcacctgcgtcgtcgggcccaacggctctggcaagagcaacgtc
gtcgacgcgctggcctgggtgatgggggagcagggcgccaagacgctccgcggcggcaag
atggaggatgtcatcttcgcgggcacctccacccgcggtccgctcggccgggcggaggtc
gccctcacgatcgacaactccgacggggccctcccgatcgagtacaccgaggtgacgatc
acccgcacgctgttccgcaacggaggcagtgagtacgcgatcaacggtcgcggctgccgg
ttgctcgacgttcaggagctcctgagcgactccggtctcggtcgcgagatgcacgtgatc
gtcgggcaggggcagctcgatgcggtgctgcgcgcgaccccggaggagcggcgcggcttc
atcgaggaggcggcgggcatcctcaagcaccgccgccgcaaagagaagaccctccgcaag
ctcgaggcgatgcaggccaacctcacccgcctctccgatctcgccggcgagatccggcgc
cagctcaagccgctcgggcgccaggccgaggtcgcccgccaggcccagacgatcgcggcc
gtggtccgcgacgcccgtgctcgcctcctggccgacgacgtggtggctctgcgcgcggcg
ctcgacggattcgcgcgctccgagagcgagcggcacagcgagcgcgtcctgctccaggag
cggctcgagcaggtcaccctgcgcctcgcgcggctcgaggcggaggcggtcggtgacgcc
gtcgacgacgcgcggcgcaccgccttcgagctggaatcggtgcaggagcggctgcgcaac
ctctcggcgctcgcggggcagcgcctcgcaatgctcgagatcgaggctgaccagccgcag
atccagccgcgggtcaccccgcagcagatcgaggaggcgggagtcgagctggagcggctg
cggcaggccgtcctcgacgccgaggccggctgggtcgatgctcagcgcgcgaccgtcgcc
gcccgaaccgccctcgacgccacggacgacgagatcgccgcccagtcggcacgggtctcg
cgctacgacctcgagctctcgagcttcggcgggcaggcggacacggcggcatcgcgactc
gcgtcggtccgcggcgaggtcctccgtgcgcagaacaccctggactccgccgggcagcgc
cgggacgccgcccgacaggcactggacgctctcgaggacgagatcggcgaggccgggcgc
ggagcggacggcacgctcgacgagggctacgagctcgctcagtcggccgtcgtccaggcc
gaggccgagatcgggagactgcgcgaggagctgcatgcgctggagcgcgaccgtgaggct
ctggcggcgaggagcggtgccctctcgctcgccctcgatgtctctgacggctccgccgag
ctcgtcgccgcgcggctcgacggcgtgctgggcagggtcgccgagcggatccaggtgcga
ccgggcttcgaggccgcggtggcggcggcgctcggcgcgatcgccgacgcggtcgcggtc
gagtcgttcgcgcaggccgaggcggcgctcggcgaggccgtcgaccgcgagctcggccgg
gtcgagctgctggtcgccggcgcgcggcggccgccggtcgatctcccggtcccggagggt
gccctgcgtgcggtcgagctggtcacggcgcctcccggcgtcctggccctcctcgagacg
gtcgtcgtcgtggaggacctggccaccgcccgccgtctcctccccggactgaccggggga
gccgtccccgtcaccgtcgtcacccgcgacggcgccacggtctcggacatcctcctcagc
gccggctcgggcgggcagcgcagccggatcgagctcgtctccgagcgcgactctgccgcg
acccgtctggaggaggtcgagcgcctcctcgaccgcctccgcttcgaggtcgccgagcag
aacggggcgctgcgagcggcgaaggagcagtcgacgctcgctctctcggccctccgcgag
cacgacgcagcccgggcggcgcacaccgagcgcctgggccgggtgcgtgctcagctcgaa
gccgcgaccgccgagcacggacgcggcgagaaggcgttggccatcgcctccgagcgggtc
ggcgacgccgagcgcgcctcccagcgggcgagggaggctctcgacgaagcccgagcccgc
ccgcggcccgtcctcgacgtcagcgctcgcgacggactccagcgcggggtcgacgccgct
cgcgagcgcgagatcgaggcccgtctcggcgtcgagaccgcgaaggagcgggtgcaggcc
gagcagtctcggggcgagtcgctggcccgccggctggcggacgagcgggcagccgccgag
gaggcggcgcgccgggccgtcgtccgccgccgccagcgcgaggccgccgcagaggtgagt
gccgctctcccggccgtgctcgcctccgtcgagcggtcggtgcaggaggcgcgcgacgag
ctggtcacggccgaggcggcccgctcgcagcagaacgaggagctccggacgctgcgccgc
gaggaggcgaccctgcgcgagcggctgcagtccgtcaccgagagcgtgcacggcctcgaa
ctgcagatctccgagaagcggctccagctgaccggtcttctcgagcgcgccggctccgag
ctcgggctcaccgaggacgtgctcgtcgaggagtacggtccggaggtcggcgtcccggac
gagaccgacgagcagcaggagccgcgccgttacgtccgcgaggagcagcggcgccgtctc
gagaaggccgagaggcagctcggtcagctcggccgggtgaatccgctggctctggaggag
ttcgccgccctggagcagcggcacgtcttcctcaccgagcagctcgccgatctcaccagc
acccgccgcgacctgctcaccatcatcgaggagctcgatgagaccatgcagtcggtcttc
gcctccgccttcgaggacacgcaggccgccttcgccgatgtgttccccgtgctcttcccc
gggggcaccggcagcatcagcctgaccgacccggagaacctgctcaccaccgggatcgag
gtcgccgtgagaccggccggcaagaagatcgagcgtctctccctgctctcgggaggcgag
cgctcgctcgcggcggtggcgttcatggtcgcgatcttcacgtcgcggccgagcccgttc
tacatcatggacgaggtggaggcggcgctcgacgacgcgaacctcggccggctgctgagc
atcttcgaggacctccggacctcgagccagctcatcgtgatcacccaccagaagcgcacg
atggagatcgcggacgcgctctacggcgtatcgatgcgccaggacggcgtgtcggccgtg
gtcggtcagcgggtgcaggcaccgcccgcctga
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