Rathayibacter tanaceti: GSU10_09625
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Entry
GSU10_09625 CDS
T06377
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rte
Rathayibacter tanaceti
Pathway
rte00300
Lysine biosynthesis
rte00470
D-Amino acid metabolism
rte01100
Metabolic pathways
rte01110
Biosynthesis of secondary metabolites
rte01120
Microbial metabolism in diverse environments
rte01230
Biosynthesis of amino acids
Module
rte_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GSU10_09625 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GSU10_09625 (lysA)
Enzymes [BR:
rte01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GSU10_09625 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
FAS_AT_central
Motif
Other DBs
NCBI-ProteinID:
QHC57032
UniProt:
A0AAE6RMN1
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All DBs
Position
complement(2046221..2047648)
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AA seq
475 aa
AA seq
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MDAARAPQHPLAPDWLRTPDDANELVEGIWSDGARRDADGVLWVAGVAATELVRRYGTPL
YVVDEADARRRAVELRDVFARELARIGTGVTVYYAGKAFLSTEVARWMRGEGLNLDLSSG
GEMAVALAAGIEPERFGLHGNNKSLAEIDRAVEVGAGTIVLDSLLEIERVAAAAERHGRV
QAVRLRVNSGVHAHTHEFLATAHEDQKFGLALADCPAAVARIRSFPSLRFLGLHCHIGSQ
IFGAGGFAESASRLLDVHAALLADGPVPELNLGGGFGIAYTSADDPTPIAEIAAAVADAV
AEQCAVRGIPVPHIAIEPGRSLIGPAGLTLYEVGTVKDVVVGPEGATAVRRYVSVDGGMS
DNARPALYGADYTALLANRSSSAEPALVRVAGKHCESGDIVVHDDFLPADVGPGDLLAVA
ATGAYCWSLASNYNYLGRPPVVAVRDGRSRVLVHGETEEDLLRRDAGIERKATSR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atcgacgccgcccgcgctccccagcatccgctcgcgcccgactggctgcgcacccccgac
gatgcgaacgagctcgtcgaggggatctggtcggacggcgcccgtcgtgacgcggacggt
gtgctctgggtcgccggagtcgccgccacggagctcgtgcgccggtacggcactcctctc
tatgtggtcgacgaggcggatgcccggcgccgggccgtcgagctccgcgacgtgttcgcc
cgcgagctcgcccgcatcggcacgggcgtcaccgtctactacgcaggaaaggcgttcctg
tcgaccgaggtcgcccgctggatgcgcggcgagggcctcaacctcgacctctccagcggc
ggggagatggccgtcgcgctcgctgcgggaatcgagcccgaacgcttcggcctgcacggc
aacaacaagtcgctcgccgagatcgatcgtgccgtcgaggtcggcgcgggcacgatcgtg
ctcgacagtctcctcgagatcgagcgcgtcgcggccgcagccgagcggcacgggcgggtg
caggccgtccgcctccgcgtgaacagcggcgtgcacgcgcacacccacgagttcctcgcc
accgcgcacgaggaccagaagttcggcctcgcgctcgccgactgcccggccgccgtggcg
cgcatccgctcgttcccgtcgctgcgcttcctcggcctgcactgccacatcggctcccag
atcttcggggcgggcggattcgcggagtccgcgtcgcgcctgctcgacgtgcacgcagcc
ctgctcgcggacggcccggtgcccgagctcaacctcggcggcggcttcggcatcgcgtac
acgagcgccgacgatcccacgccgatcgctgagatcgcggcggccgtcgcggacgcggtc
gctgagcagtgcgcggtgcgcgggattccggtgccgcacatcgcgatcgagccggggcgc
tcgctgatcgggcccgccggcctgaccctctacgaggtcggcaccgtcaaggatgtggtg
gttggcccggagggagcgacggccgtgcgccgctacgtcagcgtcgacggcgggatgagc
gacaacgcccgccctgcgctctacggagccgactacacggcgctcctcgcgaaccgctcc
tcctcggccgaacccgcgctggtgcgggtcgccggcaagcactgcgaatcgggcgacatc
gtcgtgcacgacgacttcctgcccgccgacgtcgggccgggcgatctgctcgccgtcgcg
gcgaccggcgcctactgctggtctctcgccagcaactacaactacctcggccgtcccccg
gtcgtcgccgtgcgcgacgggcgctcccgcgtcctcgtgcacggcgagaccgaggaggac
ctcctccgccgcgacgccggcatcgaacgaaaggcgacctcccgatga
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