Rathayibacter tanaceti: GSU10_10685
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Entry
GSU10_10685 CDS
T06377
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
rte
Rathayibacter tanaceti
Pathway
rte00020
Citrate cycle (TCA cycle)
rte00190
Oxidative phosphorylation
rte00650
Butanoate metabolism
rte00720
Other carbon fixation pathways
rte01100
Metabolic pathways
rte01110
Biosynthesis of secondary metabolites
rte01120
Microbial metabolism in diverse environments
rte01200
Carbon metabolism
Module
rte_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rte_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rte_M00149
Succinate dehydrogenase, prokaryotes
rte_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GSU10_10685 (sdhB)
00650 Butanoate metabolism
GSU10_10685 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
GSU10_10685 (sdhB)
00720 Other carbon fixation pathways
GSU10_10685 (sdhB)
Enzymes [BR:
rte01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GSU10_10685 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_17
Fer4_7
Fer4_9
Fer4
Fer4_6
Fer4_2
Fer4_16
Fer4_20
Fer4_4
Fer4_18
Fer4_21
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
QHC56051
UniProt:
A0AAE6RL60
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All DBs
Position
2296107..2296868
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AA seq
253 aa
AA seq
DB search
MSTATLEQPPAAPAAPEAFTVTFIIRRFDPEVDAEPRWQDFDVEMYSTDRVLDALHRIKW
DQDGSLTFRRSCAHGICGSDAMRINGRNRLACKTLIKDLDISQPIYIEAIKGLPLEKDLV
VDMEPFFASYREVQPFLVASTPAPKGKERVQSVADRARFDDTTKCILCAACTSSCPVFWT
DGQYFGPAAIVNAHRFIFDSRDDAGGARLDILNDKEGVWRCRTTFNCTEACPRGIQITQA
IAEVKQAVIRGRA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgcgaccctcgagcagccgccggctgcccccgccgccccggaggcgttcacc
gtcaccttcatcatccgccgcttcgaccccgaggtggacgcggagccgcgctggcaggac
ttcgacgtcgagatgtactcgaccgaccgggtcctggatgcgctgcatcgcatcaagtgg
gaccaggacggatctctgacgttccgccgctcctgcgcacacggcatctgcggctccgac
gcgatgcgcatcaacggccgcaaccggctggcctgcaagaccctgatcaaggatctcgac
atctcgcagccgatctacatcgaggcgatcaagggcctgcccctcgagaaggacctcgtc
gtcgacatggagccgttcttcgcctcctaccgcgaggtgcagcccttcctggtcgccagc
accccggcacccaagggcaaggagcgcgtgcagtcggtcgccgaccgcgcccgcttcgac
gacaccaccaagtgcatcctctgcgccgcctgcacgtcctcgtgccccgttttctggacg
gacgggcagtacttcgggccggctgcgatcgtgaacgcgcaccgcttcatcttcgactcg
cgcgacgatgcgggcggcgcgcgcctcgacatcctcaacgacaaggaaggcgtgtggcgg
tgccgcacgaccttcaattgcacggaggcgtgcccgcgcggcatccagatcactcaggcg
atcgccgaggtcaagcaggccgtcatccgcggccgcgcctga
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