Rathayibacter tanaceti: GSU10_11885
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Entry
GSU10_11885 CDS
T06377
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rte
Rathayibacter tanaceti
Pathway
rte03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GSU10_11885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rte03021
]
GSU10_11885
03400 DNA repair and recombination proteins [BR:
rte03400
]
GSU10_11885
Enzymes [BR:
rte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GSU10_11885
Transcription machinery [BR:
rte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GSU10_11885
DNA repair and recombination proteins [BR:
rte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GSU10_11885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QHC56263
UniProt:
A0A166HQW5
LinkDB
All DBs
Position
complement(2531404..2532390)
Genome browser
AA seq
328 aa
AA seq
DB search
MLIAQRPTLTEENISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVREDVTEIILNIKGLVVSSEHDEPITAYLRKQGAGQVTAADISAPAGVEIHN
PELVIATLNDKAKFELELTIERGRGYVSATQNRSEFSEAGQIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKPAISPRDAIASAGRTLTELFGLARELNNAAEGIEIGPAPVD
AVLSTELSMPIEDLDLSVRSYNCLKREGINNVNELVALSETQLMNIRNFGQKSVDEVKEK
LTELGLSLKDSVPGFDGAHFYSYDDESI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgcttatcgcacagcgtccgacgctcaccgaggagaacatctcggagttccgttcccgc
ttcgtcatcgagcctctcgagcccggcttcggctacacgctcggcaattcgctgcgtcgc
accctgctgtcctccatccccggcgccgctgtcaccagcatccggatcgacggggtcctg
cacgagttcacgaccgtcccgggcgtccgcgaggacgtcaccgagatcatcctgaacatc
aagggactcgttgtctcctccgagcatgacgagccgatcaccgcctatctgcgcaagcag
ggcgccggccaggtcaccgccgcagacatctcggcgccggccggtgtcgagatccacaac
cccgagctcgtcatcgccacgctgaacgacaaggcgaagttcgagctcgagctgaccatc
gagcgcggacgcggttacgtctcggcgactcagaaccgcagcgagttctccgaggccggc
cagatcccggtcgactcgatctactcgcccgtgctgaaggtcacgtaccgcgtcgaggcc
acccgtgccggcgagcgcaccgacttcgaccgcctggtcgtcgacgtggagacgaagccg
gcgatctcgccgcgcgacgcgatcgcttccgcgggtcgcacgctgaccgagctcttcggc
ctcgcccgcgagctgaacaacgcggccgagggcatcgagatcggccccgcgccggtcgac
gcggtcctctcgaccgagctgtccatgcccatcgaggacctcgacctgtcggtgcgcagc
tacaactgcctcaagcgcgagggcatcaacaacgtcaacgagctcgtcgccctctcagag
acgcagctcatgaacatccgcaacttcggtcagaagtcggtggatgaggtcaaggagaag
ctgacggagctgggcctgtcgctcaaggactcggttcccgggttcgacggcgcccacttc
tacagctacgacgacgagagcatctag
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