Rathayibacter tanaceti: GSU10_12060
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Entry
GSU10_12060 CDS
T06377
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rte
Rathayibacter tanaceti
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rte03032
]
GSU10_12060
03400 DNA repair and recombination proteins [BR:
rte03400
]
GSU10_12060
Enzymes [BR:
rte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GSU10_12060
DNA replication proteins [BR:
rte03032
]
Prokaryotic type
DNA Topoisomerases
GSU10_12060
DNA repair and recombination proteins [BR:
rte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GSU10_12060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF58
Motif
Other DBs
NCBI-ProteinID:
QHC56295
UniProt:
A0A162GRU9
LinkDB
All DBs
Position
complement(2556268..2557251)
Genome browser
AA seq
327 aa
AA seq
DB search
MADTRAQRLRRTDSSGRGFTRVGAGSGFSYRDPRGATVTDQDLRTRFDGLGIPPAWKDVW
IAPYPNGHIQATGVDSAGRRQYIYHPTWREQKDRIKFDRALRLAEALPGARRAVTVALRG
EGPTRERALATAFRMLDTGSLRVGSERYAKEHGSIGLSTLLCAHATTRGDRVALAFPGKS
HQAWTSEILDHDLSRVVRALKRRGPNARLLAWKDGRQWRPVSAPDINDYVRERAGDDFTA
KDFRTLHGTVAAAVSLAKAGPQATQRARNAAIAQAMRDASDVLGNTPTVARASYVDPRLL
DHFRAGETIDPSRPASAETAVRALLFE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggctgatactcgcgcgcaacgacttcgcagaaccgactcgagcggtcgtggcttcacc
cgggtcggcgccggttcgggcttcagttatcgcgaccccaggggtgcgacggtcaccgat
caggacctgcgcacccgtttcgacggcctcggcatcccgcccgcctggaaggacgtgtgg
atcgcgccctaccccaatggccacatccaggccaccggagtcgactccgccgggcggagg
cagtacatctaccatccgacctggcgcgagcagaaggaccggatcaagttcgatcgcgca
ctccgcctcgccgaggccctgccgggcgcccgccgcgccgtgaccgtcgctctgcgtggc
gaggggccgacacgggagcgcgcactcgccacggcgttccggatgctcgacaccggatcg
ctccgcgtcggcagtgagcgctatgcgaaggagcacggcagcatcggcctctcgacgctg
ctgtgcgcgcatgccacgacccgaggcgaccgcgtcgccctagcgttccccggcaagagc
catcaggcctggacgagcgagatcctcgaccacgatctttcacgcgtcgtccgcgcactc
aagcgccgcggcccgaatgcccgcctgctcgcctggaaggacggcaggcagtggcggccg
gtgtcggctccggacatcaacgactacgtgcgcgaacgcgcaggcgacgacttcacagcg
aaggacttccgcacactgcacggaaccgtcgccgccgcagtgagcctggcgaaggccggc
ccgcaagcgacgcagcgcgctcggaacgccgcgatcgcgcaggccatgcgcgacgcctcc
gacgtgctcggcaacaccccgacggtcgcccgtgcgagctacgtcgatccgcggctgctc
gaccacttccgcgccggtgagacgatcgacccttcgcgcccggcctccgccgagaccgcc
gtccgggctcttcttttcgagtag
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integrated database retrieval system
