Rathayibacter tanaceti: GSU10_13805
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Entry
GSU10_13805 CDS
T06377
Name
(GenBank) type IV secretion protein Rhs
Organism
rte
Rathayibacter tanaceti
SSDB
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Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
Motif
Other DBs
NCBI-ProteinID:
QHC56599
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All DBs
Position
2919802..2925246
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AA seq
1814 aa
AA seq
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MADLGAIEEDVPFAAGVAEAVVSAFTDAAAVVEGQSGSRAGSAVTALAEFRGRFSEVFRQ
NAQTGATDAAELVARLREVATAAGRLRDEAAKEQRRRVLAREWKREQDSRNLVEQLGATL
FGEEDPPVGPAAEQVSIPVEQGAVGARQTPAPGGGGMGGGTSSARPEDLRAFADASSSAN
DELRERPGRLRGLLTDFAEQCRWGHLDADSVVSGVVSWLAANDQDVQWARSIADAFAAAG
GDGTVSTVADSALALALGSAGVALSREDIAITPAQVYGAPPTSGYADDPVNTTTGNFLET
EVDLGFTGGTGSLRWERTYNSLDERAGAFGAGWSSVAEVRLRVEDDGATLVLPDGRELLF
PRQGEGWDRAVGESRWLARESDPEGTGERLVVSGNDGSRWLFTAGGRWLSAGSGPGTRVD
VEYDEHGALTRLRHERGRWVAVEWSGGRIVVAHASDGRRVEYEYDAGRLVAAAGPGGTRR
YGWNAQGLIESVTDAGGVVEVRNRYDAKRRVVSQTSPFGRTTRYAYLPGRATVVSDTDGS
RSNTWISDTRGRLVGIIDPAGRRQSMSYDAAGNLLTATGRDGTVTAHAYDHRGRLVRTKT
PSGADITRGYDESDRVTTVVAEQGGVTSYEYADDEDRSPSVVIDPEGGRTRLTWVDGQLT
EVTDPEGVSVRLGYDPFGDLISTTDADGNTARLLRDQAGRVVAAVTPSGARTEYRYTPAG
LLASRRDPLGATWRYEYDSGGRLTALVDPLGARTVMEHGEHGAVSRTIDPLGRAITREFD
DLGNVSAALLPDGSSWRFAYDALSRLTETTDPAGHLWRREYDADGALSALIDPTGSRATV
FTDPHTTAVSDSAASSRTRFDPLGRPVATEAHDGSTALTVYDRCGRPVELVDEEGGLTHL
IRDAAGRITEQIAPSGATTRFEYDRCGRLASLTDPAGASTTLEYDADGRQIRWRGPTGET
GWSEYDAAGRATARHTPGRGTARYRYDPLGRVVWSHDSWHGTRRFRYDAAGRLVEAVNGI
GGVTRYEYDDRGRNTVIIDPLGGITRRTFDATDHAVAATDPLGRTTTAGYDPAGRQLWQQ
DPEGHRLSWTYDAAGRETSLTADGRLLSETRRDLRARQAVIIDHTGPDGPLEHTLTWNRR
DQLIRRTRNDRGLAWEYDADGNRTAVIGPDGARTRYERDSTGRVTAIEHPRLGRATFEYD
AAGHLIASTAGGIAQTWRHHDGFVTEHSTGTGAGTGSSLTRMTRDEDGRITRLDAPTGGV
DYRYDDAQQLLETRAEAGTTRFEYDAGGRPTRETDSDGRTSVHDYDAAGQLLSTTRDDGT
RVEYVYDGLGRRTRVTDSDGGQRSYAWSAAGWLESVTDGHLTTTLHVDTLGELASINGAA
TWWDTASYAPALLAVGDTPILATPGGVTGIGDTWVGAGWRTERATSADDPWGTAAPGTLP
PDINLPTGVGLTGSGGISIAGLEWLGHRAYDPATRGFLSADPLDPVIGAGWSGNPYSYAG
NDPLHAVDPTGLRPVTDADLRAYRDGNNGAFAAAGDWWADNWEYVAAGAMVVAGVALMFT
GVGGPVGMVLIGAASGALISGGVSIATQKATTGGVDWGQVGIDSAVGALGGAAGGAAEAL
AYRAGASAFKAEVIANTADGGVSGAAQYLTGPGPHNPGGLLGATAGGGAGGAVTGGLGGA
ATRRLGTPADKLLDDISAVPRLPQDINVSPTPPLAKEPLGRPVGKNTNQNEEVWNLVDQL
QRTRGVSDIRVNQQQINADGERVGINRPDLQYTDANRVRRYIEWDTQSSGRGPDHAARLR
ANDPNGVIELRTVD
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
gtggcggatctgggtgcgatcgaggaggacgttccgttcgctgcgggggtggcggaggcg
gtggtgtcggcgttcaccgacgcggcggctgtggtcgaggggcagtccggttcgcgggcg
gggtccgcggtgacggcgctggcggagttccgtggccggttctcggaggtgttccgccag
aacgcgcagaccggcgcgacagacgcggccgagctggtggcgcggctgcgcgaggtcgcg
acggcggccggccggttgcgggacgaggccgcgaaggagcagcggcgccgggtcctggcg
cgggagtggaagcgggagcaggactcccggaacctggtcgagcagctcggagcgacgctg
ttcggcgaggaggacccgccggtcgggcctgctgccgagcaggtgtcgatccccgtcgag
cagggtgcggtcggggcgcgtcagaccccggccccgggcggcggcgggatgggcgggggg
acctcgtccgcgcggccggaggatctgcgggcgttcgccgatgcgtcgtcgtccgcgaac
gacgagctgcgggagcgtccggggcggttgcggggcctgctgacggatttcgctgagcag
tgccggtgggggcatctggacgcggacagcgtggtgtcgggggtcgtctcgtggctggcc
gcgaacgaccaggacgtgcagtgggcgcgcagcatcgcggacgcgttcgcggcggcgggc
ggggacggaacggtgtccacggtcgcggacagtgcgctggccctcgcgctggggtcggcg
ggggtggcgctgtcccgggaggacatcgcgatcacgcccgctcaggtgtacggggcgccg
ccgacgtccggctacgcggacgacccggtgaacacgaccaccgggaacttcctcgagacc
gaggtcgatctggggttcaccggcggaacgggctcgctgcggtgggagcgcacctacaac
tccctcgatgagcgtgccggggcgttcggtgcgggctggtcctcggtggccgaggtgcgg
ctgcgggtggaggacgacggcgcgacccttgtgctccccgacgggcgggagctgctgttc
ccccgccagggcgagggctgggaccgggcggtcggcgagagccgatggctcgcccgcgag
agcgacccggagggcacgggtgagcggctcgtggtctcggggaacgacggctcccggtgg
ctgttcacggcgggcgggcggtggctgtcggcgggcagcggcccggggacacgggtcgac
gtcgagtacgacgagcacggcgcgctgacgcggctgcggcacgagcgcggccgatgggtg
gctgtggagtggtcgggcgggcggatcgtcgtcgcgcacgcctccgacggccgccgggtg
gagtacgagtacgacgccggccggctcgtcgcggcggccgggccgggcgggacgcgccgg
tatggctggaacgcccagggtctgatcgagtcggtgacggacgcgggcggagtcgtcgag
gtccgcaaccgctacgacgcgaagcgacgagtggtgtcgcagacctcaccgttcgggcgc
accacccggtacgcctacctgcccggccgggcgacggtcgtgtcggacacggacgggtcc
cgctcgaacacctggatctcggacacccggggccggctcgtggggatcatcgatccggcg
gggcgccggcagtcgatgagctacgacgccgccgggaacctcctcaccgcgaccggccgc
gacgggacggtcaccgcgcacgcctacgaccatcgcggccggctcgtccgcacgaagacc
ccctccggcgcggacatcacccgcggctacgacgagtccgaccgggtgaccacggtcgtc
gccgagcagggcggagtcacgagctacgagtacgcggacgacgaggaccgctccccgagt
gtcgtgatcgacccggagggtggacgcacccgtctgacctgggtcgacggccagctgacc
gaggtcaccgacccggagggggtgagcgtccgcctcggctacgacccgttcggggatctg
atcagcacgaccgacgcggacgggaacaccgcgcgtctgctgcgcgaccaggcgggccgc
gtggtcgccgccgtgaccccctccggagcgcgcaccgagtaccgctacacaccggccggt
cttctcgcttcccgccgcgacccgctcggcgcgacctggcggtacgagtacgacagcggc
ggacgcctcaccgctctcgtcgatccgctcggggcccgcaccgtgatggagcacggcgag
cacggcgcggtgtcccgcacgatcgacccgctcggccgggcgatcacgcgggagttcgac
gacctcgggaacgtctcggccgcgctgctgccggacgggagctcgtggcggttcgcgtac
gacgcgctctcgcgactgacagagaccaccgaccccgccgggcacctctggcgccgcgag
tacgacgccgacggcgcgctgagcgccctgatcgacccgaccggctcgcgcgccaccgtc
ttcaccgacccgcacaccaccgccgtctcggactccgccgcctcctcgcgcacccgcttc
gaccccctcggccggcccgtcgcgaccgaggcgcacgacggatccacggccctcaccgtc
tacgacaggtgcggccgccccgtggaactcgtcgacgaggaaggcggcctcacccacctg
atccgcgacgccgccggccgcatcaccgaacagatcgccccctccggcgccaccacgcgg
ttcgagtacgaccggtgcgggcgcctcgcgtccctcaccgatccggccggcgcctcgacg
acgctcgagtacgacgccgacgggcgccagatccgctggagaggacccaccggcgagacc
ggctggagcgagtacgacgccgctggccgcgccaccgcccggcacacccccggccgcggc
accgcccgctaccgctacgacccgctcggccgcgtcgtctggtcccacgactcctggcac
ggcacccgccggttccggtacgacgcggccgggcggctcgtcgaagccgtcaacggcatc
ggcggcgtcacccggtacgagtacgacgaccgcggccgcaacaccgtcatcatcgacccc
ctcggcggcatcacccggcgcaccttcgacgccaccgatcacgccgtcgccgccaccgat
cccctcggccgcaccacgaccgccggctacgaccccgccggccgccagctgtggcagcag
gaccccgaggggcaccgcctctcctggacctacgacgccgccggccgcgaaaccagcctc
accgccgacggacgcctgctctccgaaacccgccgcgacctccgcgcccggcaagcggtg
atcatcgaccacaccggccccgacggacccctcgagcacaccctcacctggaaccgccgc
gaccagctcatccgccgcacccgcaacgaccgcggcctcgcctgggagtacgacgccgac
ggcaaccgcaccgccgtcatcggccccgacggtgcccgcacccgctacgaacgcgacagc
accggacgggtcaccgcgatcgaacacccccggctgggccgtgccacgttcgagtacgac
gccgccggacacctcatcgcctccaccgccggagggatcgctcagacctggcggcaccac
gacggcttcgtcacggagcacagcaccgggacgggagcgggcaccgggtcgtcgctgacc
cgcatgacccgggacgaggacggccgcatcacccgcctcgacgcacccaccggcggcgtc
gactaccgctacgacgacgcccaacaactcctcgaaacccgcgcagaggcgggcacgacc
cgattcgagtacgacgccggcggacgccccacccgcgagaccgactccgacggccgcacg
agcgtccacgactacgacgccgccggccaactgctctcgaccacccgcgacgacggcacc
cgcgtcgagtacgtctacgacggcctcggccgccgcacccgcgtcacggacagtgacggc
ggccagcgctcctacgcctggagcgccgcgggctggctcgaatccgtcaccgacggacac
ctcaccacgaccctgcacgtcgacaccctcggcgaactcgcgagcatcaatggtgctgcg
acgtggtgggacacggcctcgtacgcgcccgcactgctcgccgtgggcgacacaccgatc
ctcgccacccccggcggagtcaccggcatcggcgacacctgggtcggcgccggctggcgc
accgagcgcgcaaccagcgccgacgacccctggggcacagccgcacccgggacgctcccg
cccgacatcaacctgcccacaggcgtcggcctgaccgggagcggcggcatctccatcgcg
ggcctggaatggctcggccaccgcgcctacgaccccgccacgcgaggcttcctgtcggcg
gatcccctcgatccggtgatcggcgcgggctggtccgggaacccatactcctacgccggg
aacgacccactgcacgcggtggatccgacaggtctgcggccagtcacagacgcggatctg
cgggcgtatcgggacgggaacaacggggcgttcgctgcggcgggcgactggtgggccgac
aactgggagtacgtcgccgcgggggccatggtcgtggcgggtgtcgcgctgatgttcacc
ggggtgggtggtcctgtcgggatggtcctcatcggagcagcgtccggggcgctgatttcc
ggcggagtgtcgatcgcgacccaaaaggcgaccaccggtggtgtcgactgggggcaggtc
gggatcgactccgcggtcggcgcgctcggcggcgccgccggaggagccgccgaggccctc
gcctaccgcgctggggcgagcgccttcaaggccgaagtgatcgccaacaccgcggacggt
ggtgtgtccggagcggcccagtacctcaccggcccgggcccgcacaacccgggcgggctc
ctcggcgccaccgcaggaggaggcgcgggcggagccgtcaccggagggctcggcggcgcc
gccacccgccgcctcggcacaccagcagacaaactactcgacgacatatcagcagtacca
cgacttccgcaggacatcaatgtcagcccgacgccaccgctagcgaaagagcccttaggg
cggccggtaggtaagaacacaaatcaaaacgaggaagtctggaacctcgtcgaccagctt
cagcgcacgaggggagtctccgacattcgagtgaaccagcaacagatcaatgcggacggt
gagcgcgtcggaatcaacagacccgacctacaatataccgatgccaacagagttcgtcgc
tacattgaatgggacactcaatcctccggtcggggtccggatcatgcggcaagattgaga
gctaatgacccgaacggggtcatcgaacttcgaacagtggattaa
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