Ramlibacter terrae: HK414_03445
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Entry
HK414_03445 CDS
T08049
Symbol
ampD
Name
(GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
KO
K03806
N-acetyl-anhydromuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
rtea
Ramlibacter terrae
Brite
KEGG Orthology (KO) [BR:
rtea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtea01011
]
HK414_03445 (ampD)
Enzymes [BR:
rtea01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
HK414_03445 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rtea01011
]
Peptidoglycan biosynthesis and degradation
Amidase
HK414_03445 (ampD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_2
PrmC_N
Motif
Other DBs
NCBI-ProteinID:
QJW83542
LinkDB
All DBs
Position
complement(641838..642431)
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AA seq
197 aa
AA seq
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MPPEAPGVLWRDGWYRFAHRCDSPNFGPRPAGARVDLVVVHSISLPPGVYGGDEVRRLFT
NTLDWDAHPYFKSIEGMQVSAHFFIRRDGALWQFVSCDDRAWHAGASSYRGRPNCNDDSV
GIELEGLEGETFEAAQYEALASVCASLAQHYPVRHIAGHEHIAPGRKNDPGAGFDWALLR
RQLAWPETSFPTLSLRP
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgaggcgcccggcgtgctgtggcgcgacggctggtaccgcttcgcgcaccgt
tgcgattcgcccaacttcggcccgcgcccggccggcgcgcgggtcgacctggtggtggtg
cactcgatcagcctgccgcccggcgtgtacggcggcgacgaagtgcggcggctgttcacc
aacactctggactgggacgcccacccgtacttcaagtccatcgagggcatgcaggtgtcg
gcgcatttcttcatccgccgcgacggcgcgctgtggcagttcgtcagctgcgacgatcgg
gcgtggcacgccggcgcgtccagctatcgcgggcggccgaactgcaacgacgattccgtc
gggatcgagctggaagggctcgaaggcgagacgttcgaggcggcacaatacgaagcgctg
gccagcgtgtgcgccagcctcgcgcagcactacccggtgcgccacatcgcgggccacgag
cacatcgcaccggggcgcaagaacgatccgggggcggggttcgattgggcgctgctgcga
cgccagctcgcgtggccggagacgtcgttcccgacactgtcattgcggccttga
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