Ramlibacter terrae: HK414_07540
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Entry
HK414_07540 CDS
T08049
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
rtea
Ramlibacter terrae
Brite
KEGG Orthology (KO) [BR:
rtea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtea02000
]
HK414_07540
Transporters [BR:
rtea02000
]
Other transporters
Pores ion channels [TC:
1
]
HK414_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QJW83894
UniProt:
A0ABX6P1C6
LinkDB
All DBs
Position
1392268..1394433
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AA seq
721 aa
AA seq
DB search
MRTRSIMLPALLAQAFAAGAQGVPDDAGSERQLDPMTVTARRSIEQRFFAAGSLVVVDRQ
DIENLGAFSVADVLRQLPGVVVTTSGDGSVEIRMRGMDRNATQLLVDGQRVSGGRSQLPL
DQLPSELIERIEVVRAPTAEFSGATGGTLNIICCGRRRSSARRCCASPTTTCGGATRRSR
SSRPAGRSAASRRSRRRARRRCSPRAYFVALASTGYILGSQVHRTVIESTGTTETDASPR
FRRHELSLVPRLSGRLGPLDQLALRGTFSNNQIDGQNDTTGAVTATGGAPAPFATAEVHS
YDRSYAQGAADWTHRFGGSKLETTLSASRARESLERNGSSVGGAGPAVPIYAFDDDRQEE
TWSLSTKLTGTRSPLLWTLGAQAERRTMDVRNQNGAVRLDLDAVLDRHVLWGQNEWEVFS
GSTLTAGLRGETLQIRSRSGAATLVDRRDSFLQPSLHLRTPLSPDLQFRANAARITRNPR
IWDLLDRSIVAQGRNNINNPDYRGNPALRPETAWTLDTGFERRLPQDGQGGINLFVRRTS
DTVAAVTRFSGGRWVEQRVNIGDAIVWGLELDAKTGLAWLGLPRDWTLAANAGLLQSRMT
SGVNEGERIPGQPRYTASITIAKPIRRGPGGLFGGGTLSLTGPADWRRRPASTAATARAP
CWTCTSASWCAAGAIGASACSTSAMRGTSAAAATRTPPAAAQSSSVMTLTPRLYLTVGTS
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcggaccagatccatcatgctgccggccttgctggcacaggctttcgccgcgggcgcg
cagggggtgcccgacgacgcgggcagcgagcgccagctcgacccgatgaccgtgacggca
cggcgttccatcgagcagcgctttttcgcggccggttcgctcgtggtcgtcgaccggcag
gacatcgagaacctcggcgccttctccgtggccgacgtgctgcggcaactgcccggcgtg
gtggtcaccacctcgggcgacggcagcgtggagatccgcatgcgcggcatggaccgcaac
gccacgcagctgctggtcgacggccagcgcgtgagcggcggccgctcgcagcttccgctc
gaccagcttccctccgagctgatcgagcgcatcgaggtcgtgcgcgcgccgacggccgaa
ttctccggggccaccggcggcacgctgaacatcatctgctgcggcaggcgacggtcaagc
gcgagacggtgctgcgcgtcaccgacaaccacgtgtgggggcgcaacgcgccgcagtcgt
tcttctcggccagcgggccgctcggcggcgagccgccgaagccggcggagggcgaggcgc
cggtgcagcccccgggcctatttcgtcgcgctggccagcaccggctacatcctcggctcg
caggtgcaccgtaccgtgatcgagagcaccggcaccacggagaccgatgccagcccgcgc
ttccggcggcacgagctgtcgctggtgccgcgcctgagcggccggctcggccccctcgac
cagctggcgctgcgcggcaccttcagcaacaaccagatcgacggccagaacgacaccacc
ggcgccgtcaccgccaccggcggggcgccggcgcctttcgccaccgccgaagtgcattcc
tacgaccgcagctacgcgcagggcgcggccgactggacgcaccgcttcggcggcagcaag
ctggagacgacgctgtcggcgagccgcgcgcgcgagagcctcgagcgcaacggcagcagc
gtcggcggtgccggccccgcggtgccgatctatgcgttcgacgacgaccggcaggaagag
acgtggtcgctttcgaccaagctgaccggcacgcgcagcccgctgctgtggacgctgggc
gcgcaggccgagcgccgcacgatggacgtgcgcaaccagaacggcgcggtccggctcgac
ctcgatgcggtgctcgaccggcatgtgctgtgggggcagaacgagtgggaggtcttcagc
ggcagcacgctgacggcgggcctgcgcggggagaccctgcagatccgcagccggtccggc
gcggcgacgctggtggaccggcgcgacagtttcctgcagccctcgctgcacctgcgcacg
cccttgtcgcccgacctgcagttccgcgccaacgcggcgcgcattacgcgcaacccgcgc
atctgggacctgctcgatcgcagcatcgtcgcgcagggccgcaacaacatcaacaacccg
gattaccggggcaacccggccctgcggccggagaccgcgtggacgctcgacaccgggttc
gagcggcggctgccgcaggacgggcagggcggcatcaacctgttcgttcggcgcaccagc
gacaccgtggccgccgtcacgcgcttttccggcggccgctgggtggagcagcgcgtcaac
atcggcgacgcgatcgtctgggggctggagctcgatgccaagaccgggctcgcgtggctg
gggctgccgcgcgactggacgctggccgccaacgcggggctgctgcaatcgcgcatgacc
agcggcgtcaacgaaggcgagcgcattcccggccagccgcgctacaccgccagcatcacc
atcgccaagccgatccgccgcgggccgggcggcctgttcggcggcggcacgctgtcgctg
acggggccggccgactggcgacgtcgcccggcatcgacggccgcgacagcgcgcgcgcca
tgctggacctgtacatcggccagctggtgcgcggctggggctattggcgcatcggcgtgt
tcaacatcggcgatgcgcggcacgagcgccgccgcagctacacggacgccgccggcggcc
gcgcagagcagcagcgtgatgacgctgacgccgcgcctgtacctgaccgtgggcacgagc
ttctga
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