Ramlibacter terrae: HK414_23175
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Entry
HK414_23175 CDS
T08049
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
rtea
Ramlibacter terrae
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
RtcR
AAA
Mg_chelatase
AAA_19
AAA_2
MCM
Motif
Other DBs
NCBI-ProteinID:
QJW85252
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Position
4312604..4314127
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AA seq
507 aa
AA seq
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MSGQSWLIAWIGKTDHEAAEGKLGKDVGPIATALTGEPRYSRIYLLTNYDFARSKRFCAW
LEKTTGYDSKQVDLYQVDLESPIDYAGIYAAVSANLKGAGLPREDVELTFHLSPGTPAMA
AIWIILSKTRFPAKLIQTSRERGLEPVNFFFDLASDFLPEFLQRSGERITRLAEGAKELA
PAFDKIIHRSTAIRQQIELARRIAVLDVPVLVLGETGTGKELFAEAIHAASPRSAKPFIA
VNCGAIAPELASSELFGHKRGAFTSAVADRKGHFREADGGTLFLDEVGDLPLDTQVRLLR
ALQTGEVTLLGASKPVKVNVRIVAATHRDLASDVAAGRFREDLFHRLAVGILRLPPLRER
DQDAAMLIEHFLAQINADAKGRPEAQEKKLSEGAKKVLQSYEWPGNIRELYHTLVRAAIW
SKGPSISAEDAQAALLQIRRQGDTVLGRPLTQGFDLKRILDEVARDYIARALKQSGDRKT
VAAELLGFPNYQTFGNWMKRLGVDSTD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcaatcgtggctaatcgcctggatcgggaagaccgaccacgaggcggcagaa
ggaaagttgggcaaagacgttggcccaattgccactgcacttaccggcgagccccggtac
agccgaatctatctgctgacaaactacgacttcgcgcgcagcaagcgcttctgcgcctgg
ctggagaagacaacggggtacgactcaaagcaggttgacctgtaccaagtcgacctcgag
agcccgatcgactacgcagggatctacgccgcagtctctgcgaatctcaagggcgcaggc
ctgccccgcgaggacgtggaactgacgttccatctcagcccgggcactcccgcgatggcg
gcgatctggatcatcctttccaagacgcgttttccggccaagctcatacaaacgtctcgc
gagcgtggcctcgagccggtgaacttcttctttgacctggcaagcgacttccttccggag
ttcctccagcgaagcggtgagcgtattacccggttggccgaaggagccaaggagctcgcg
cccgcgttcgacaagatcatccatcggagtactgcgatacgacagcagatcgagctggct
cgccgcatcgcagttctcgacgtgccggttctcgtcctcggcgaaacaggcacaggcaag
gagttgttcgccgaggcgatccacgcggccagccctcgaagtgccaagccgttcattgcc
gtgaactgcggcgcaattgcccccgagctggccagctcagagctgttcgggcacaagcga
ggcgcgttcaccagtgccgtggcagatcgcaaggggcacttccgggaggcagatggcggc
actctcttcctagacgaagttggagatctgccgctcgacacgcaagtgcgcctgctaagg
gcactccagaccggcgaggtcacccttctcggggcgtccaagcccgtgaaagttaatgtc
cggatcgtggcggcgacccaccgtgacctcgcttcggatgttgcagcggggcgattccgg
gaagacctgtttcaccggttagcggtcgggattctgcgtctgccgcctctgcgagaacga
gatcaggacgcggcgatgttgatcgaacacttcctggcgcagatcaacgcggatgccaaa
gggcgcccggaggcacaggagaagaaactttctgaaggagcaaagaaagttctccaatct
tacgagtggccgggcaacatccgggagctttaccacacgctcgtgcgagcagcgatctgg
tccaaggggcctagtatcagcgccgaagatgctcaagccgcgctgcttcagattcggcgg
caaggcgacaccgttctggggcgacctctcacgcaaggctttgatttaaaacgaattttg
gacgaagttgctcgggactacatcgcccgggcgctgaagcaatcgggtgaccgaaagacg
gtggcggccgagctgctcggcttcccgaactaccagacgtttggcaactggatgaagcgc
cttggcgtggactccaccgactag
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