Ramlibacter terrae: HK414_25935
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Entry
HK414_25935 CDS
T08049
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rtea
Ramlibacter terrae
Pathway
rtea03030
DNA replication
rtea03430
Mismatch repair
rtea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HK414_25935
03430 Mismatch repair
HK414_25935
03440 Homologous recombination
HK414_25935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtea03032
]
HK414_25935
03400 DNA repair and recombination proteins [BR:
rtea03400
]
HK414_25935
Enzymes [BR:
rtea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HK414_25935
DNA replication proteins [BR:
rtea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HK414_25935
DNA repair and recombination proteins [BR:
rtea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HK414_25935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QJW85493
UniProt:
A0ABX6P806
LinkDB
All DBs
Position
complement(4826905..4827579)
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AA seq
224 aa
AA seq
DB search
MWWDRARSDPGATRCVVLDVETSGLDTARDWLLAIAAVGVRIDWPAGRLSLLPADSFEVV
LRQELASPRDNILLHGIGVQRQREGVPMADGLRGFIAAVGDAPLLAFHAAFDQALIVRHA
RDALGLRLPNSWLDIEHLCAVTHPKVRARALDDWLAHFGIGCAVRHQAAADTGPNANCSG
SGRRWRRNAAAGATCSGWPRTTAGCAAPRSPGGRMRDPRRCPGS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgggaccgcgcacgctccgatccgggcgccacgcgctgcgtggtgctggacgtg
gaaaccagcgggctcgacacggcacgcgactggctgctggccatcgccgcggtgggggtg
cgcatcgactggccggcgggcaggctgtcactgctgcccgccgacagcttcgaggtggtg
ctgcggcaggagctggcttcgccgcgcgacaacatcctgctgcacggcatcggcgtgcag
cgccagcgcgagggcgttccgatggcggacggcctgcgcggcttcatcgccgccgtcggc
gacgcgccgctgctggccttccacgccgcgttcgaccaggcgctgatcgtccgccatgcg
cgcgatgcgctgggactgcggcttcccaacagctggctggacatcgagcacctgtgcgcg
gtgacgcacccgaaggtccgcgcccgggcgttggacgactggctggcgcatttcgggatc
ggctgcgcggtgcggcaccaggccgccgccgacaccgggccgaatgcgaactgcagcgga
tctggccgaaggtggcggcggaatgccgcggctggcgcgacgtgcagcggctggccgcgc
accaccgctggctgcgccgcgcctaggagcccgggcggcagaatgagggatccgcgccgg
tgcccgggctcctag
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