Rana temporaria (common frog): 120909061
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Entry
120909061 CDS
T07929
Name
(RefSeq) pulmonary surfactant-associated protein D-like isoform X1
KO
K10068
pulmonary surfactant-associated protein D
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120909061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120909061
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
rtem04091
]
120909061
Membrane trafficking [BR:
rtem04131
]
Endocytosis
Phagocytosis
Opsonins
120909061
Lectins [BR:
rtem04091
]
C-Type lectins
Collectins
120909061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
CSDE1
DUF5075
Surfac_D-trimer
Motif
Other DBs
NCBI-GeneID:
120909061
NCBI-ProteinID:
XP_040176619
LinkDB
All DBs
Position
8:127644963..127681861
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AA seq
268 aa
AA seq
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MNPLTNCLCILVVVAVVFSLSYSETPAMCPGLNGRDGRDGANGPKGDPGVHGEPGIPGER
GNTGPPGKVGPKGNPGEKGNTGDTGLAGNKGAKGEIGVGLPGGQGQKGEKGSPDVESIKK
TVDLESRIVSLEKKVFWLKNVLLFHGGKQVGDKVFVTTGGEENFDNAQKTCREAGGRLTA
PRNAAENSAIEEIIRTKGNGKKAFLGITDSEVEGTFKYSTGQTITFQNWNPGEPNNNKNI
EDCAEMISNGKWNDMPCNEQRLVICEFE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcttacaaactgtctatgcatcctagttgttgtggctgtggtttttagcctg
agttattcagaaacaccagccatgtgtccaggtttaaatggtagagatggaagagatggg
gctaatggcccaaagggtgacccaggtgtgcatggagagcctggaattccaggtgaaaga
ggaaacacaggtcctccagggaaagtaggaccaaaaggcaatccaggggaaaaaggaaat
actggagatacaggcctggctggaaataaaggggcgaaaggggaaataggagttggtttg
ccaggaggacaaggccaaaaaggagagaaaggaagcccagatgtggagagcatcaagaaa
acggtggatttggaaagtcgaatcgtttccttagagaaaaaagtgttctggctaaaaaat
gttttgctcttccatggtggtaaacaagttggtgataaagtgtttgtgactactggtggg
gaagaaaactttgacaatgcccagaagacttgtagagaagctggaggaagattgaccgct
ccacgaaatgcagcagaaaatagtgcgatagaagagataatccgcactaagggaaatgga
aagaaagctttcctgggtataacagattcagaagttgaagggactttcaagtactctaca
ggtcaaacgattactttccagaattggaacccaggagagccaaataacaacaagaacatt
gaagattgtgcggagatgatatccaatggtaaatggaatgacatgccttgcaatgagcag
cgcctagttatctgtgaattcgagtaa
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