Rana temporaria (common frog): 120909120
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Entry
120909120 CDS
T07929
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120909120 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120909120 (ERCC6)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120909120 (ERCC6)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
120909120 (ERCC6)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
120909120 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
TraC_F_IV
AAA_14
RHH_8
Motif
Other DBs
NCBI-GeneID:
120909120
NCBI-ProteinID:
XP_040176715
LinkDB
All DBs
Position
8:140438727..140517923
Genome browser
AA seq
1359 aa
AA seq
DB search
MSDEIPIVKEQLQSEPEQSPSSPAIPGPSSAHTSSACPEDVGPQKQHGGIVHINRQQIQA
VEAADQASELQGLGLAVYDQEVLERGVLQQVDDAINEASRAAQIAEAEKEKENLLDELRS
CVTSLRQINKIIEQLAPQAAVSKEIARKLESVKRQKHNKDQQLKKIKAKQRRLAVMLGEN
QEEMDMEQDNLGDTEDVLTTSLGSMMMPCQDSEWEDLIRTGQMTPFGTKILPKEDRKPRR
LMLNDASDFEKYLADQAEMTAHRKRNLTPKKERKKPAVQEDPTKINKANQLLTIPSAEKR
LKKKMRKLQKKAFQTQFRTGIPRKKSSIPEEGSQGDDSEGSVYTSETKEESIDVDENDDD
DEWVPDSPGSDYELKPLPRKATAKRPRQPVLDPEFLPSSDEDEEEFSNTAKGRRCRDDGN
FKYYKHRLRQWHKQQSKEAEQHRAAEESEDSDVEFDESFRIPGVLWKKLYKYQQTGVRWL
WELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSRIRTRGSDYRYEGLGPSIIVCPATVM
HQWVKEFHTWWPQFRVAVLHETGSFPGKKVKLLGEIGKSRGILITSYANMRLLQEDLQKY
HWHYIILDEGHKIRNPNAAVTMACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLG
TLPVFMEQFSVPITMGGYTNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLCLPD
KNEQVLFCRLTDEQRQVYQTYIDSKEVYGILNGDMRVFPGLIALRKICNHPDLFTGGPKI
LKGTRDEDLEEGDEFGYWKRSGKLIVVEALLRIWQQQGHRALLFTQSRQMLQILEVFIMS
MGYSYVKMDGTTTVASRQPLITKYNEDASIFVFLLTTRVGGLGVNLTGANRVLIYDPDWN
PSTDTQARERAWRIGQMKEVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFK
SNDMYELFTLSSPDAGQGTETSAIFAGTGSDVKLSRPPKKQIRGINGVNEENSPIAVKNK
KPVPLSATSTLSICSEGFPQDGLQKKPDLQADLSENLKAVKEHGSSPENNHRKHKAKTKH
QDKGKRLKDGNGERISHLLKQKPFKKPENEEQQEKHKSSDEYVLEKLFKKSGVHSVMKHD
VIMDSSNPDYVLVEQEASRVAQEALRVLKVSRQRCNAASSGIPTWTGTSAGVPPKNRFGQ
KKNPLLLQPAISESKIPQDKCKDAKITKQLAVIRTATSSHFNGDAQSKEPTTSALSSTSL
LARMKERNHLLLPSREDSETGATTTDSTEHDELLTDVRNFIAFQAHGEGEASTQELLHEF
ENKLSSSQSCVFRELLRRLCTFHRNSNGSGVWRLRPEFR
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgaaatccctattgtgaaagaacagctacagtcagagcctgaacagtcaccg
agcagcccagctattcctggcccgtcttctgcccatacttcctctgcttgtcctgaagat
gtgggaccgcaaaaacaacatggcggcattgtacacatcaaccgccagcagatccaagcc
gtggaagcggccgatcaggcttcggaattgcagggattgggcttggcagtgtacgatcag
gaggtattggagcgcggagtcctccagcaagtggatgacgccattaatgaagcctctcgg
gcggcacagattgccgaagcagaaaaagaaaaagaaaatcttttggacgagttacgttcc
tgtgtcacctccttgcgtcaaatcaacaagatcattgaacagcttgctccacaagctgca
gtctccaaagagattgctcgaaaactggagtctgtaaaacggcaaaaacataataaagat
cagcaactgaagaagatcaaagctaaacaaagacgcctggctgtgatgttgggagagaat
caagaggagatggatatggagcaagataatttaggcgatacagaagatgtgttaaccaca
tcattgggtagtatgatgatgccttgccaagatagtgagtgggaagatctcatccgtact
ggacagatgaccccgtttggtacaaaaattctcccaaaagaagatcgcaaaccacgacgc
ctgatgctcaatgatgcctcagactttgaaaagtaccttgctgatcaagcagagatgacg
gctcatagaaagcgtaacttaactcctaaaaaagagagaaagaaaccagcagtacaagag
gaccccacaaaaataaataaagcaaatcaacttttaactattccaagtgccgagaagaga
ttgaaaaagaagatgaggaaattacagaaaaaagcttttcagactcagttcaggacagga
attccacgtaaaaaaagttcaatccctgaagaaggtagccaaggagatgatagtgaggga
tctgtttacacatctgagacaaaagaggagagcatagatgtggatgagaatgatgatgat
gatgaatgggtgccagatagcccaggctctgattatgagttgaaacctctgcctcggaaa
gcaactgccaaaagaccccgacagccagttttagatccagagtttcttccaagttctgat
gaagacgaggaagagttctccaacacggcaaagggtagacggtgtagagatgatggaaat
tttaagtactacaagcatcgcctacgacagtggcataagcagcaatctaaagaggcagag
cagcatagagcagctgaggagtccgaggacagtgatgtggagtttgatgagagttttcga
atacctggagttctctggaaaaagctgtacaagtaccagcaaacaggtgtccgttggctc
tgggaactgcattgccagcaggcagggggcattctgggagatgagatgggattgggtaaa
actatccagataattgcctttctggcaggtctaagctacagccgaataaggacgcgaggc
tctgattacagatatgaaggactgggtcccagtattattgtgtgtcctgctactgtaatg
caccagtgggtgaaggaattccatacttggtggcctcagttccgtgtagctgtacttcac
gagacaggaagttttcctggaaaaaaggttaagctgctcggggaaattggcaaaagtcgt
ggtattctgattacatcttatgctaatatgcgccttttgcaagaggatctccaaaaatat
cattggcattacatcatcctggatgagggccacaagatccgcaatcctaatgcagcagtc
actatggcttgcaaacagttccgtaccccacatcgtataatcctgtctggttccccaatg
caaaacaatttgcgggagttatggtctctgtttgactttgtgttccctggaaaacttggt
acacttccagtgttcatggagcagttttctgtacccatcaccatgggagggtatacaaat
gcttctcctgtacaggttaagactgcatataaatgtgcatgtgtgctacgtgatactata
aatccctatcttctgagacgtatgaaagcagatgtaaagatgagcctgtgccttcctgac
aaaaatgaacaggtgctgttctgtcgtttaactgatgagcagcgacaggtgtaccagacc
tatatagattccaaggaagtctatggaatactaaatggagacatgcgggttttccctggt
cttattgctttacgaaagatctgcaatcatccagatttgttcactggaggccctaaaatt
ctaaaggggacgagagatgaggatttggaagagggtgatgagtttggttactggaagcgc
tctggaaaattgatagttgtagaagcactactgagaatctggcaacagcaaggacacaga
gctctcctattcactcagtcacgacagatgttgcagatcctagaggtcttcatcatgagt
atgggttattcctatgtcaagatggatgggaccacaactgttgcctctcgtcaacccctc
atcacaaagtacaatgaggatgcttcgatctttgtcttccttcttacaaccagagttggc
ggtctaggcgttaatcttacaggagccaacagagtccttatctacgatcctgattggaac
cccagcactgatacccaggcacgagaaagggcatggagaatcggccagatgaaagaggtc
actgtatataggctgctaactgcagggactatagaagaaaagatatatcacaggcaaatc
tttaagcagttcttgactaacagagttttgaaagacccgaagcagaggcgcttcttcaaa
tccaacgatatgtatgaattgttcacattgagcagtccagatgcaggtcaaggaacagag
accagtgcaatttttgcagggactggttctgatgtgaaactctcaagacctcctaaaaaa
caaataaggggcattaatggtgtaaatgaagagaattcccctatcgctgtaaaaaacaaa
aagccagtgccattgtctgccactagcaccttgtccatttgctcggagggctttccacaa
gatggcttgcaaaaaaaacctgatttacaagcagatcttagtgagaacctaaaagctgtc
aaagaacacggctcatccccagaaaacaatcaccgaaaacacaaagccaagacgaaacac
caggataaagggaaaaggctaaaagatggtaatggagagaggatttcgcatttactgaag
caaaagccattcaagaagccagagaatgaagagcagcaggaaaaacacaagtcaagtgat
gaatatgttttggaaaaattgtttaaaaaatctggtgttcatagtgtcatgaagcatgat
gttattatggattcctcaaatccagactatgtgctggttgaacaagaagcaagtagagtg
gcccaagaagcactacgtgtcctaaaagtttcccgtcaacgctgtaacgcagcctcctct
ggaatcccaacatggactgggacaagtgctggcgtccctccaaaaaacagatttggacag
aaaaagaacccacttttgcttcaaccagctatttcagaaagcaagatccctcaggacaaa
tgcaaggacgccaagatcacaaagcagctagctgtgattaggactgctacatcatcccat
tttaatggagatgcccagtccaaagaaccaactacttctgcattgtcgtccacttctttg
cttgctcgcatgaaagaaagaaatcatctcttgcttccttcgagagaagacagtgaaaca
ggagctacaacaacagactctacagagcacgatgagcttctcacagatgtgagaaacttc
atagcattccaagctcatggtgaaggtgaagccagcacacaagaactacttcatgagttt
gaaaacaaactttcttcctcacagtcctgtgtctttcgggaacttttgcgtaggctgtgt
acttttcatcggaatagtaatggttctggagtctggaggctaagacctgaattccgctga
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