Rana temporaria (common frog): 120909441
Help
Entry
120909441 CDS
T07929
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K12800
NACHT, LRR and PYD domains-containing protein 3
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04217
Necroptosis
rtem04621
NOD-like receptor signaling pathway
rtem04623
Cytosolic DNA-sensing pathway
rtem04625
C-type lectin receptor signaling pathway
rtem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120909441
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120909441
04623 Cytosolic DNA-sensing pathway
120909441
04625 C-type lectin receptor signaling pathway
120909441
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120909441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120909441
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rtem04054
]
120909441
Membrane trafficking [BR:
rtem04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
120909441
Pattern recognition receptors [BR:
rtem04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120909441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
NOD2_WH
PYRIN
LRR_6
FISNA
nSTAND3
AAA_22
AAA_16
LRR_4
Motif
Other DBs
NCBI-GeneID:
120909441
NCBI-ProteinID:
XP_040177145
LinkDB
All DBs
Position
8:173948250..173986868
Genome browser
AA seq
1005 aa
AA seq
DB search
MAASSSQGQMNWQTPGDLIIYSLEDLIESDFKRFKNKLSDFCYENKPPIPRGKLEHADCI
TTKDILIDTHGGEGALDVIIKVLTLIGLLGPANDLQIRRTKMAKLNTITNSNRLAECKKD
YMNSMKEDFQRIKEYNSRRGETVSLQNTYIELQLIKGPQIMEEKMHEILNSGKGHLHNLK
EKSGEDSPITIQTLFDPDKDGFIPKIVVLQGPAGIGKTMTSRKIMLDWASGNLYKDEFDF
VFHLSCKELSTIIGPISLVGLLSRTCKLQLSSDDLVSILKDPDNHRKLLFILDGFDELSW
TLEKKSEACRDIFEETHKDLLLQRLLRKQILKPSSLIITTRPLALEKLHSFVEESRDVEV
MGFTEEDRKEYLLNFFKNEDDADKALSIIKDNAILYTMCAVPIVCWIVCTVLKPQIKQDL
DLLQYNTATSIYLLYLKSLIKHHCRNQPTNACLKKLCALAKEGILNQKILFEMEDLNRHG
LSLSEVESVFLNENLFHQDIDTQTFYSFIHLSVQEFLAALYYVLGDGSGNEDGTTGPREG
TSIPEICKGNSLSAMCVKHPHLTLAVRFLFGLLNEKDVRKFSKDTGINISLPARREMEGW
LMGEWLLTNLYTGNSLAPHYTEAISCLYETQDQDIIRKIFSSSPHLEVAGARKGGFWTGE
NCSKQLCYCLQTCESLQALSFTYLILDPKYLKMLSSLIHRCQQLSFQNVKLHSGDSPRKD
KLFTFTQYDELPDKEEELFISSAEEVPANLSWLTYSQSNIRELKFNHCGLTASSCNDICS
FMWENRLLTSLDLSDNRLRDPGLKILCEGLKNPACTLKVLRIWQCKLTPLCCDDLRSLLI
TNRSLTHLDLSTNTLMDSGIKILCDGLKDPGCTLQELKIEACSVTPLSCDDLRSVLIANR
SLTKLDLSLNFLEDSGIKLICEGLKHPDCILQELRFDFCHTTLSCCDDLCSAISTNRNLR
MLETRIKTEISESVLCFEDLRHLGCTVEKFGQQIDITYRRPRLQE
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcctcctcacaaggacagatgaattggcaaacccccggggatctcatcatc
tattctctggaagacctaatagaaagcgatttcaaaagatttaagaataaattgtctgat
ttctgttatgaaaataaacctcccattcccagaggaaaactggaacatgcagattgtatc
accacaaaggacatcctgatagacacccatggaggggaaggagctctggatgtcataatt
aaagtcttgaccctgattggtcttctgggacccgcaaatgacctccagataagaagaaca
aaaatggctaaattgaatacaatcacgaacagcaacagattagcagagtgtaagaaggac
tacatgaactcaatgaaggaggattttcagcggattaaagaatataactctcgtagaggg
gagactgttagtttacaaaatacatacatcgagttacaactaataaagggaccccagatc
atggaagaaaagatgcatgaaatattaaattcaggcaaaggacatctacataacttgaag
gaaaaatcaggtgaagattccccaataacaattcagacgctgtttgatccagataaagat
ggtttcatcccaaagattgtggtgctacaaggacctgctgggattggaaaaactatgacc
tccaggaagatcatgctggactgggcctctgggaatctctacaaagatgagtttgacttt
gtgtttcatctgagctgtaaagaactcagcaccatcattggacccataagccttgtggga
cttttatccagaacctgcaaactgcagttaagttcagatgacctggtgtctattctgaag
gatcctgataatcacagaaaacttctcttcatacttgatggttttgatgaattgagttgg
actctggagaagaaatctgaggcttgtcgtgacatttttgaagaaactcataaagactta
cttctccagagattgctcaggaaacagattctgaaaccgtcttctctgatcatcaccaca
aggccactggccctggagaaacttcactcatttgttgaggaatcacgggatgttgaagtc
atgggatttacagaggaagatcgtaaggaatatttactcaacttcttcaaaaatgaagat
gatgcagacaaggcactcagtattataaaagacaatgccattctgtacaccatgtgtgcc
gtccccattgtatgctggattgtgtgtactgttttgaaaccccaaataaaacaagacttg
gacttattgcagtacaacacagccacctctatatatctcctgtacctgaagagtctaata
aagcaccattgcaggaaccagccaacaaacgcttgcctaaagaaattgtgtgctctggct
aaggagggaattttgaaccagaaaatcttgtttgagatggaagatctaaatagacatgga
ctttctctgtctgaggttgagtctgtatttttgaatgaaaacctctttcatcaggacatc
gacacccaaaccttctacagcttcatccatctgagtgtacaggagttccttgctgctctc
tattatgtgctgggtgatggttctggaaatgaggacgggaccactggaccgagagaggga
acttctatccccgagatctgtaaaggaaattcactttcagcaatgtgtgtaaaacaccca
catttaacattagctgtgcgattcctattcgggctgctcaatgaaaaggacgttcgaaaa
ttttctaaagacacaggcatcaatatttccctcccagccagacgtgaaatggaaggatgg
cttatgggagaatggctcttgacaaacttgtatacaggaaacagcttggcacctcattac
actgaagccatttcatgtctgtacgagactcaggaccaggacatcataaggaaaatcttc
tctagttctccacatttagaagtggcaggggcacggaagggtggtttctggacaggagag
aattgttctaaacagttgtgctattgcttgcagacctgtgaaagtcttcaggctctctct
ttcacataccttatactggatcccaaatacctgaaaatgttatcttcgctaatacacaga
tgtcaacagctcagttttcagaatgtaaaactgcatagtggagacagtccgagaaaggac
aaactgttcacctttactcaatatgatgaattgccggataaagaagaagaattattcatt
tcatccgctgaagaagtacctgccaatctttcctggctgacttactcacagagtaatata
agggaattaaagttcaaccattgtggtctgactgcatcatcctgcaatgatatttgctca
tttatgtgggaaaacagactgctcaccagtctagatctatcagacaacaggctacgggac
cctggtttaaaaatcttgtgtgagggacttaaaaatcctgcctgtaccctgaaggtgctg
agaatctggcagtgtaagttgactcctttgtgctgtgatgacctccgctctcttctaatc
acaaaccgatctctcacccatctggatttatcaacaaatacattgatggactctgggatt
aaaattctgtgtgacggactcaaagatccaggctgtaccctacaggagctgaaaattgaa
gcttgtagtgtgactcccttgagctgtgatgacctccgatctgtccttattgcaaatcga
tctctcaccaaactggatttatcattgaactttctagaggactctggaataaaacttatc
tgtgagggactgaaacacccagactgtatcctgcaggaactgagatttgacttttgtcac
acaacattatcgtgctgtgatgatctgtgctcagctatctctacaaaccgaaatctgagg
atgctggaaacgagaataaaaactgagatctcagaatcggttctctgctttgaggatctg
cgacatcttggctgcactgtggaaaaatttggacagcaaattgatattacatacagaaga
ccaagacttcaagagtga
DBGET
integrated database retrieval system
