Rana temporaria (common frog): 120909780
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Entry
120909780 CDS
T07929
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 3-like
KO
K12800
NACHT, LRR and PYD domains-containing protein 3
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04217
Necroptosis
rtem04621
NOD-like receptor signaling pathway
rtem04623
Cytosolic DNA-sensing pathway
rtem04625
C-type lectin receptor signaling pathway
rtem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120909780
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120909780
04623 Cytosolic DNA-sensing pathway
120909780
04625 C-type lectin receptor signaling pathway
120909780
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120909780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120909780
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rtem04054
]
120909780
Membrane trafficking [BR:
rtem04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
120909780
Pattern recognition receptors [BR:
rtem04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120909780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NOD2_WH
CARD
NLRC4_HD2
FISNA
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
120909780
NCBI-ProteinID:
XP_040177444
LinkDB
All DBs
Position
8:190160434..190170194
Genome browser
AA seq
773 aa
AA seq
DB search
MATPSSGRKHFVDQHKEELIRRIDNVDVVLSQLLQDKLLVSEDYEAVTTRKSSQDRMSKL
FSVIHHWTNSQKDKLYQALKRNYPATVSVMEKTMDQVTDEEFEKCMKTHKENIKYHFELI
KDRNARLGESTPLRRRYTPLVLLLKFRGEEEKKRELSSSGEEQAQILIDRSSEEYSPTSI
EEFFNPSDTGGVPKTVIIHGAAGIGKSLTGRKIILDWATNNLYGGKFDFLFYLSYKDFTQ
ITGNLSLVGLINKTSRLNFRPEVMRYILSNGERVGFVIASFEEMKCSLKEKSEICQDPLQ
EANKDVLLRSLLKGQLVKGASFIITTRPFLLEQLQTFLPDVPRLVEIVGYTADARAHYLD
IFFDNRESEKAVDITRRNEVLFSLATVPFMCWVISTVTNQQLSKYPSNFTTNTSMFLYYL
KGLIIYHSRNGGMVHCLKKVCALANEGLLNQKVLFEEEDLKRHKLSVSLVESVFLSNVFF
HGDIGKRTCYSFVHHSFQEFLAALHYTMPGEGESSKSGTRAVRESTYLPEICKGRSLMDL
LEKQPHMALAVRFLFGLLNQAQIEDFNSSADCALSFQGTTAMISWLFGGDITEFNTERIL
FLYETRDDEFMTYVASRAVNLTFSQCQKADNWVYQLAFCLKACEGKKVTLSGYVLKKEHM
SALVPVLKKCSQVCFRSCRFADDVNSTSSWKNSMFTSLVMQDSKIQDLCLLGCILPTSTC
EVLDNATRQSRSLSILYVMFKVNTKKEHEEMRRYHQVFKSPECTVSTKRYVCV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggccactccctcctcaggccggaaacactttgtggaccagcacaaggaggaactgatc
cgccgtatagacaacgtagacgtggtcctatcacagctcctgcaggacaagcttctcgtc
tcggaggactatgaggccgtgaccaccagaaaaagcagccaggataggatgagcaaactc
ttctccgtcatccaccattggaccaattcccagaaggacaaactctaccaggccctgaag
aggaactacccggccaccgtctctgttatggagaagaccatggatcaagtaacggatgaa
gaatttgaaaagtgcatgaagacccacaaggagaacatcaaataccattttgagttaata
aaggaccggaacgcccgcctgggggagagcacccccctgaggaggaggtacaccccgctg
gtgctcttgctgaagtttcggggggaagaggagaagaagcgggagttgagttcctcgggg
gaggagcaagctcaaatattgattgacaggtcttccgaggagtattctccgacctccatc
gaggagttcttcaacccgtcggacaccggcggcgttccaaagaccgtgatcatacacgga
gccgccggcatcgggaaatctctgaccggccgcaagatcatcttggactgggccaccaac
aacctctacggagggaaattcgacttcctgttctatctcagttacaaggatttcacccaa
atcaccggcaatctcagcttagttggacttatcaacaagaccagccggttgaatttccgc
cccgaggtcatgaggtacatcctgagcaacggggaacgggtgggcttcgtgatcgccagc
ttcgaagaaatgaaatgcagtttgaaggagaagagtgagatctgccaagacccgcttcag
gaggccaacaaagacgtcctcctgaggagccttctgaaggggcaactcgtcaagggggct
tctttcatcatcaccaccagaccctttctactggaacagctgcagacgttcctaccagat
gtgccccggcttgtggagatcgtcgggtacacggcggacgcccgggcgcattaccttgac
attttcttcgacaacagagagtcggagaaggccgtggacatcaccaggaggaatgaagtt
ctcttcagtctcgccaccgtgccgttcatgtgttgggtcatctccaccgtcaccaaccaa
cagctttccaagtatccctccaacttcaccaccaacacctccatgttcctctactacctg
aagggtttgatcatctaccacagccggaacggcggcatggtccactgcctgaagaaggtc
tgcgccttggccaatgaaggccttctgaaccagaaggtcctcttcgaagaagaagacctg
aaaagacacaaactttccgtgtctctggtggaatccgtcttcctgagcaacgtcttcttc
cacggcgacatcgggaagcgcacctgctacagcttcgtccaccacagctttcaggagttc
ctggctgcactgcactacaccatgcccggggagggcgagagcagcaaatccgggacgagg
gcggtgagagagagtacttacctgccggagatctgtaagggacgatccttaatggacctg
ctggaaaaacagccccatatggccctcgccgtcagatttctcttcggcctcctgaaccaa
gcgcagatcgaagacttcaacagcagcgccgactgtgccctgtccttccaaggcaccaca
gccatgatctcgtggctcttcgggggcgatataacggagttcaatacggagcgcattttg
ttcctgtacgagacgcgggatgacgagttcatgacgtacgtggcgtcccgtgccgtgaat
ctgaccttctcgcagtgccagaaagccgacaactgggtctaccaactggccttctgcttg
aaggcgtgtgagggcaagaaggtcactctgtccgggtacgtcctgaagaaggaacacatg
tccgcgttggttcccgtcctgaagaagtgttcccaggtttgcttccggagttgtcgcttc
gcggatgacgtgaactccacttccagctggaagaactcgatgtttacatctctggtcatg
caggacagtaaaattcaagacttgtgcctgttgggttgtattttgcccacttctacttgt
gaagtccttgacaacgccaccaggcaaagccgcagtctctccatactttatgtaatgttt
aaagttaataccaaaaaggaacacgaagaaatgagacgctaccatcaggtcttcaaatct
ccggaatgcaccgtgtccaccaagaggtacgtctgtgtgtga
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