Rana temporaria (common frog): 120910385
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Entry
120910385 CDS
T07929
Name
(RefSeq) M1-specific T cell receptor beta chain-like
KO
K10785
T-cell receptor beta chain V region
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04020
Calcium signaling pathway
rtem04514
Cell adhesion molecule (CAM) interaction
rtem04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120910385
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120910385
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120910385
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Motif
Pfam:
C1-set
HTH_animal
Ig_3
C2-set_2
Motif
Other DBs
NCBI-GeneID:
120910385
NCBI-ProteinID:
XP_040178078
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Position
8:46818136..46886577
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AA seq
338 aa
AA seq
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MIQLNDNDRGIVLTYEASPSSIHFLDLEITTTHDRLEFKTYFKPTDRNGYIPVDSCHHRR
WLESVPRSQFLRLRRNCTRDSDFYLQSDMLKTRFLDKGYRPSLVDDAINSVSATDRASLL
QVKPKVAKQESFKWSFFTSYSIQHNEITPARTLRNFILQWLAVSTGSVQYFGEGTTIYVL
ENGEVQRPPTVNIFGPNKQEFKDHKLISLVCVASGFYPEHVQLNWIINGIPRNGLYQNVA
SKKENDTSFSTSKRLTLTRSEYFNTENKFKCEAGFIGNGSVAFAEVTGESDCGVSKESYA
MYINQGKISYIMVLFKSGLYALIVLAIIWRRKVLSGSC
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccagttgaatgataacgaccgggggatcgtattgacttatgaggctagtccctct
tcaattcacttcctggatctggagatcaccaccactcatgacagattagaatttaagacg
tattttaaacctaccgaccggaatggatacattccggtcgatagctgtcatcaccggaga
tggctagaatctgtcccacggagtcaattcctccgccttaggaggaactgcaccagggat
agcgacttctatctccagagtgacatgttgaaaactagatttcttgacaaagggtatcga
ccttcactggttgatgatgccattaattctgtctctgccacggatagggcttccctttta
caggttaaacccaaggtagccaaacaggagagttttaagtggtccttcttcaccagttat
tccattcaacataatgagattacacctgctaggacattgaggaatttcatactgcaatgg
ttggctgtgagcaccggcagtgttcagtattttggagaaggaactactatttatgtgctg
gaaaatggtgaggtacagcgtccccccacagtaaatatctttggtccaaacaaacaagag
ttcaaagatcacaaactcatctcactggtctgtgtggcaagtggcttctacccagaacat
gtacagttaaattggattattaatggcataccaagaaatggcctgtaccaaaatgtagcg
agcaaaaaagagaacgacaccagtttttccaccagcaaacgcctcactctgacaagatct
gaatatttcaacacagaaaacaaattcaaatgtgaggcgggctttattggaaacggcagt
gttgcctttgctgaggttacgggagaatcagattgtggtgtttctaaagagagttacgcc
atgtacataaaccaggggaagatttcctatatcatggttctgttcaagagtggtctgtat
gctttgatcgtcctggctatcatctggcggaggaaggttctctcaggatcttgctag
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