Rana temporaria (common frog): 120913011
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Entry
120913011 CDS
T07929
Symbol
EDA
Name
(RefSeq) ectodysplasin-A isoform X1
KO
K05480
ectodysplasin-A
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120913011 (EDA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtem04052
]
120913011 (EDA)
Cytokines and neuropeptides [BR:
rtem04052
]
Cytokines
Tumor necrosis fators
120913011 (EDA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Collagen
Motif
Other DBs
NCBI-GeneID:
120913011
NCBI-ProteinID:
XP_040178593
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All DBs
Position
9:2475526..2591391
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AA seq
340 aa
AA seq
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MAPRTDPSLCPDSSGCAWPGHCRLFLGLFAFSISLHLVTICGYLELRREVGRLSREGPRG
SGLQRDRPPGAEPRQMAPIINSLSPEDLSYLEEGNRHLRRTRRNKGSEGSENPSAARNKK
KGKKVGPPGPVGPTGPTGPPGPPGPPGPPGIPGIPGIPGSNAMGPPGPPGPPGPQGPPGN
QGPTGPTERTVPKETPPAVVHLQGQGSAIQVKNDLAGGILHDWSWTAINHRVFKLHTRSG
ELEVLVDGTYLIYSQVEVYYIKFTDFSSYEVLVDEKPFLQCTRSIEPGKTNFNTCYTAGV
CLLKAKQKIAVKIVHADISINMSRHTTFFGAIRLGEAPGS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccggactgacccctccttgtgcccggactcctcggggtgcgcctggccggga
cactgccgcctcttcctcggactcttcgccttctccatctcccttcacctcgtcaccatc
tgcgggtacctggagctccgccgggaggtgggccgcctgagccgggaggggccgaggggg
agcggcctgcagagggaccgcccaccgggggcggagccgagacagatggcccccatcata
aacagcctgagccctgaagacctgtcctacctggaggaagggaaccgacatctacggagg
acgaggaggaacaaaggcagcgaaggctctgagaatccaagcgcagccagaaacaagaaa
aaaggaaaaaaagttggaccaccaggacctgttggaccgacaggccccactgggccacct
ggacctccggggcctccaggccctcctggaataccaggcatccctggaatcccaggatca
aatgcaatgggccctccaggaccccctgggccaccgggtccccaagggccaccaggaaat
caaggacctaccggtcctacagaaaggaccgtccctaaagagactccgcccgccgtcgtc
catctgcagggccagggctccgccatacaagtgaagaatgatcttgcaggtggaatccta
catgactggtcgtggacggccatcaatcacagggtgttcaagctgcacacgcgcagcgga
gaactggaggtgctggtggatggtacctacctcatctatagtcaggtagaagtttactac
atcaaatttaccgatttttccagttacgaggtgctggtggacgagaagccgttcctgcag
tgcacgcggagtatagagccggggaaaaccaacttcaatacttgctacacggccggcgtt
tgccttttaaaagcaaaacagaagatcgccgtgaagatagttcatgccgacatctccatc
aacatgagcagacatacgacattttttggggcgatccgattgggtgaagcccccggctca
taa
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