Rana temporaria (common frog): 120913053
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Entry
120913053 CDS
T07929
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtem03041
]
120913053
Spliceosome [BR:
rtem03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120913053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
dsrm
Dicer_dsRBD
SGP
DUF6857
Motif
Other DBs
NCBI-GeneID:
120913053
NCBI-ProteinID:
XP_040178666
LinkDB
All DBs
Position
9:complement(6355761..6575319)
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AA seq
695 aa
AA seq
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MPFISMRSIRSFANDDRHVMAKHSTIYPSPEELEAVQNMVSTVECALKSVSDWMDEHSKS
ETVENDQQEKQEDTEENNNTSKDESGRVLCGVMRIGLVAKGLLIKEDMDLELVLMCKEKP
TESLLVTVRENLPLQIQKLTEETYQVEQCTEDASLIIQNSKEPKLTLKVILTSPLFREEE
NSSGGVENVAMKDPPDLLDRQKCLNALASLRHAKWFQARANGLKSCVIVLRILRDLCNRV
PTWTQLKGWPLELICEKALGTCNRPLGAGEALRRVMECLAWGIILPGGPGLHDPCEKEPT
DALAYMTVKEREEITQSAQHALRLLAFGQIYKVLQMDPLPSNKPFQKYSWSSTDREGLKR
PYDDGSCDDKDPNKKMRRNLRKILDSKAIDSNQPMNALMRLNQIRPGLQYKLLSQSGPVH
APVFTMSVDVDGTIHEASGPSKKTAKLHVAVKVLQAMGYPTGFDTDMECLSSDEKSDNEG
KNETISTNSSNNTGSSSTDSSNTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISESG
GSHDKRFVMEVEVDAQKFRGAGPNKKVAKASAALAALEKLFSGPNAANIKKKKIIPQTKG
VVSTAVSAAVQAARGRGRVAMARGAYVGAAAAAPGYITQGYAAPYGYSTAAPAYGRMDSG
SMDFLDFSMAGIPKRMVLLPVMKFPAYPVPHYSFF
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgccattcataagcatgagatccatccggtcatttgctaatgatgaccgccatgtcatg
gcaaaacactccaccatatacccatctccggaggagctggaggcagtccagaacatggtg
tccacagtggaatgtgcgctaaagtcggtctccgattggatggatgaacacagtaaaagt
gagaccgtggaaaacgaccagcaagaaaaacaagaagacactgaagaaaataataatacc
tccaaggatgagagtggccgggtgctgtgcggagtcatgagaattggcctggttgccaaa
ggcttgctcattaaggaagacatggatctagaattggttctcatgtgtaaggagaaacca
acagagagcttgttagtgacggtccgagaaaaccttccgctgcaaattcagaaactcaca
gaagagacatatcaagtggaacaatgcacagaagatgcctcactaattatacaaaattca
aaagaacctaaattaaccttaaaagttatactgacatccccactattcagagaagaggaa
aacagttcaggtggagtagaaaatgttgcgatgaaagatcctccggacttattggacagg
cagaaatgcctgaacgccttggcgtctctgcgacatgccaaatggtttcaggcgagagca
aacggattaaaatcttgtgtaattgtgctgcgtattcttcgagatttgtgcaacagagtt
cctacctggacccagctgaaaggatggccgctcgaactcatatgtgaaaaagcactagga
acttgtaataggccgttgggcgccggagaagcattacgaagagtgatggagtgcttggcg
tggggcatcattctgcctggagggccaggcctgcacgatccatgtgagaaggaacctaca
gatgcactggcttacatgaccgtgaaagaaagagaagagatcacgcaaagtgcacagcat
gcactgcgtttgttggcctttggacagatttacaaggtattgcaaatggaccctctgcca
tcaaataaacccttccaaaaatattcctggtcaagcacagacagggaaggattaaagcgg
ccatacgacgacggttcttgcgacgacaaggacccaaataagaaaatgaggcgcaatttg
cgcaaaattttggacagcaaagccatagattctaaccagccaatgaatgcactgatgcga
ctaaaccagattcgacctggcttgcaatacaaactgctgtctcaatcaggtccagtacat
gcaccagttttcactatgtctgttgatgtagatggaaccatacatgaggcctccggacca
tccaagaaaacagccaagcttcatgtagcagtaaaggttttacaggcaatgggataccca
actggttttgacaccgatatggagtgtcttagctcagatgagaaatcggacaatgaaggc
aagaacgagacaatctctacaaattccagcaataacacaggaagctccagtacggacagc
tccaatacactggaggtccgtactcagggtcctatcctaaccgccagtggaaaaaaccca
gttatggaactgaatgaaaagaggcgaggccttaaatatgagttgatatcagagagtgga
ggaagccatgacaaacggttcgtaatggaggtggaggtggacgcacagaagttcaggggt
gccggcccaaacaaaaaggtagcaaaagccagcgcggccctggctgccctagagaagctc
ttctctggtccaaacgcagcgaatatcaagaagaaaaagattattccacagactaaagga
gtggtcagtacggcggtatcggcggctgtacaggcggctcgaggaagaggacgagtggca
atggccagaggggcctatgtgggagctgctgctgctgccccgggatatataacccaagga
tatgcagctccgtatggatacagtaccgcggcgccggcttatggtcgtatggattctggg
tcgatggattttctggatttttctatggcaggtatccctaaaaggatggtcctcttacca
gttatgaaatttccagcatatccagttccccattactcctttttttaa
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