Rana temporaria (common frog): 120913090
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Entry
120913090 CDS
T07929
Symbol
BRCC3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03440
Homologous recombination
rtem04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120913090 (BRCC3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120913090 (BRCC3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtem01002
]
120913090 (BRCC3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120913090 (BRCC3)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120913090 (BRCC3)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120913090 (BRCC3)
Peptidases and inhibitors [BR:
rtem01002
]
Metallo peptidases
Family M67
120913090 (BRCC3)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120913090 (BRCC3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
120913090 (BRCC3)
BRISC complex
120913090 (BRCC3)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
120913090 (BRCC3)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
120913090 (BRCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
DUF5990
UPF0172
Motif
Other DBs
NCBI-GeneID:
120913090
NCBI-ProteinID:
XP_040178722
LinkDB
All DBs
Position
9:complement(11826442..11854060)
Genome browser
AA seq
263 aa
AA seq
DB search
MAVQAVHLEGDAFLVCVAHSLSTEREEVMGLCIGEVDIQRVVHIHSVIILRRSDKRKDRV
EISPEQLSAATIEADRLTEITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFV
GLIFSCFIEDKNTKTGRILYTCFQSVQAQKSTEYERIEIPLHVVPQETIRKVCLESAVEL
PRILCQEEQDAYRRIHSLGHLDSVTKIHNGSVFTKNLCGQMSAISGPLLQWLEDRLQQNH
QRALELEQEKEKLMQELESLESD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaagccgtgcatctggagggggatgctttccttgtgtgtgtggcccattcc
ctgagcacggagagagaggaggtgatgggactctgtataggagaggtggacattcagaga
gttgtacatatccactcggtcatcatcttacgacgatcagacaagaggaaagatcgagtg
gaaatttctcctgagcagctgtcggcagccacaatagaagccgatagacttacagaaatc
acgggtcgccccatgcgggtggttggatggtatcactcccacccgcacatcaccgtctgg
ccctctcatgtcgatgtgcgtacccaggccatgtatcagatgatggatgtcggatttgtt
ggactgatattctcctgctttatagaagataaaaatacaaagacaggacgtattttatat
acctgtttccagtcagtccaagcacagaagagcactgagtacgagagaatagagattcca
ctccatgtggttccacaagaaacaatccggaaagtatgtctggagtcggctgtggaactt
cccagaatcctttgccaggaagagcaagatgcctatcgtagaatacacagtcttggacat
ctagattccgtcacaaagattcacaatggatctgtttttactaagaacttatgtggccaa
atgtctgcgattagtggcccgctcctacaatggctggaagatcgcttacaacagaatcac
cagcgggccctggagctagagcaggaaaaagaaaagttgatgcaggagttggaaagctta
gaaagtgactga
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