Rana temporaria (common frog): 120913132
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Entry
120913132 CDS
T07929
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120913132 (APEX2)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120913132 (APEX2)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120913132 (APEX2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
SH3-RhoG_link
Motif
Other DBs
NCBI-GeneID:
120913132
NCBI-ProteinID:
XP_040178789
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All DBs
Position
9:15706931..15724155
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AA seq
519 aa
AA seq
DB search
MSVDGGKSCRMKIVSWNINGIRATRVGLKEILDSLDADIICLQETKVTRDLLDEPTAIIE
GYNSYFSFSRARSGYSGVATFCKDRAIPHAAEEGLSGQLTSQKGSVGCYGNTEEFSEEEL
LSLDLEGRTVITQHGILTSDNKEDMLTVINVYCPRADPEKPERKTYKLRFYSLLQIRAEA
ILRNGGHVIILGDVNTSHKPVDHCDPDDLEVFAENPGRQWLDQFLGVPAASKTSDVNPSE
GGLFLDTFRYFHPTQKNAFTCWHSGSRARQTNYGTRIDYILGDRSLVETEFMDSVIMPEV
EGSDHCPVKGFMKCRPVAADRCPLLCTKYLPEFAGRQQKLSQFFVVKNKDFSDGETMDPS
SSQPSTEGSEQASTRKRTQEKLNGTIRKKNKVDGKSGKVNLLDFFKPAALKATATQPQTN
TAKLEPEKELPKGTEDHLLASQKANQPQAAFWKTLLKGPPPPPNCKGHGEPCVLRTVKKA
GPNCGRQFYVCARPDGHSSNPQARCNFFLWVNKKNGMDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggacggagggaagagctgtaggatgaagattgtgagctggaatataaatggg
attcgggcaactcgggtgggactgaaagaaatccttgactcgctggatgcagacattatc
tgcctgcaggagaccaaagtgaccagggatctgctggatgaacctaccgccataatagaa
ggctacaattcctactttagcttcagtcgtgcacggagtggatattcaggggttgccaca
ttctgtaaggaccgcgcaattccacatgcggcagaggaggggctatcggggcagctcacc
agtcagaagggatctgtcggctgctatggcaacacagaggagttctcggaggaggagctg
ctatctctggacctagagggaagaacagtcatcacacaacacggcatcctaacttctgat
aacaaagaggacatgctgacggtgatcaatgtatattgtccacgggccgaccctgagaag
ccggagcgcaagacctacaagttgcgcttttacagtttgctacagatacgggcagaagct
attctgagaaatggcggccatgtgattatactgggagatgtgaacacctcgcacaagcct
gttgaccactgtgatcccgatgatctggaagtgtttgcagagaacccagggcgtcagtgg
ttggatcagttccttggtgtcccggcggcatctaaaacaagtgatgtcaatccatccgaa
ggaggtcttttccttgataccttccgttacttccaccccactcagaagaatgccttcacc
tgctggcactcaggatcgagggcccgacagaccaattatggcacccgcattgactatatt
ctgggcgaccggagcctggttgagacagaatttatggattcggttataatgccagaggtt
gaaggatctgaccattgtccggtgaaggggtttatgaaatgcaggccagttgcagcagat
agatgtccccttctctgtactaaatacctcccagagtttgcaggacggcagcaaaaactc
tctcagttttttgtggtaaagaacaaagatttttcagatggagagaccatggacccgtca
agttctcagccttcaactgaagggtctgagcaagcttccacccggaagaggacacaagaa
aaacttaatggaaccatcagaaagaagaacaaagtggacggcaagagtgggaaagtcaat
ctccttgacttttttaagccagcggcactaaaggcaactgctacacagccacaaactaac
accgctaagctggaacctgaaaaggagcttcccaaaggtacagaagaccatttgcttgct
tctcagaaagctaaccaaccacaagcagccttctggaagactttgcttaaaggacctcca
cctccacccaactgtaaaggccacggggaaccttgtgttctgcggacagtgaagaaggcc
ggtcctaactgcggacgccagttctatgtgtgcgcccgtcctgacgggcattcttccaat
ccgcaggcccggtgcaactttttcctttgggttaataaaaagaatggaatggatggctga
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