Rana temporaria (common frog): 120913177
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Entry
120913177 CDS
T07929
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtem04030
]
120913177
G protein-coupled receptors [BR:
rtem04030
]
Rhodopsin family
Vision
Opsin
120913177
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
Cytochrom_B_N_2
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
120913177
NCBI-ProteinID:
XP_040178873
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Position
9:complement(22018269..22038243)
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AA seq
365 aa
AA seq
DB search
MAATWNEAVFAARRKHDEEETTRSSVFTYTSSNNTRGPFEGPNYHIAPRWAYNVTTLWMI
FVVIASVLTNGIVLVATFKFKKLRHPLNWILMNLAIADLGETVIASTISVINQIFGYFIL
GHPLCVIEGYTVSVCGITGLWSLTVIAWERWFVVCKPFGNIKFDGKLAAGGIAFSWLWAA
CWCAPPIFGWSRYWPHGLKTSCGPDVFSGNSDPGVQSYMMVLMITCCIIPLTIIVLCYIH
VWWAIRKVAQQQKESESTQKAEREVSRMVVVMIMAYCFCWGPYTIFACFAAANPGYSFHP
LAASLPAYFAKSATIYNPVIYVFMNRQFRNCIYQLLGKKVEDGSELSSTSRTEVSSVSNS
TVSPA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacatggaatgaagctgtatttgccgctcgaagaaaacatgatgaggaagaa
accacgagaagtagcgttttcacatatacaagcagcaacaatacgcggggtccctttgaa
ggtccaaattatcacattgcacctagatgggcctacaatgtcaccacactctggatgata
tttgtagttatagcatctgttttaaccaatgggattgtcttagtagctacatttaagttt
aaaaagcttcgacaccctctgaactggatcttgatgaacttggctattgctgatcttggg
gagactgtcattgccagcaccattagtgtcatcaaccaaattttcggttacttcatcctt
ggccaccccctatgtgtgattgaagggtacactgtttcagtgtgtggtatcactggacta
tggtcattaacagtaattgcttgggaaagatggtttgttgtgtgcaaaccctttggtaac
attaagtttgatggaaaactggctgctggtggaatagcgttctcttggctttgggcagca
tgctggtgtgcacctccaatattcggctggagcagatactggccccatggcttgaagaca
tcttgtggtccagatgtgttcagtggtaacagtgatcccggagttcagtcttacatgatg
gtgctcatgatcacttgttgcataattcctctgacaatcatcgtcctttgttacatacac
gtttggtgggccattagaaaggtagcccagcagcagaaggagtctgaatccacacagaag
gctgaacgtgaggtctcaaggatggtagttgtcatgatcatggcttactgcttttgttgg
ggaccgtacacaatttttgcctgctttgctgccgccaacccaggctacagtttccatccc
ttggctgcctcgttacctgcctattttgccaagagtgccaccatttacaaccccgtcatt
tacgtcttcatgaacagacagttccggaactgcatctatcaattacttggcaaaaaagtt
gaagatggctctgaactttcttctacatctaggacggaagtatcctcagtttccaattct
accgtgtcacctgcataa
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