Rana temporaria (common frog): 120913298
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Entry
120913298 CDS
T07929
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04517
IgSF CAM signaling
rtem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120913298 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120913298 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtem04812
]
120913298 (SPTBN4)
Cytoskeleton proteins [BR:
rtem04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120913298 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
120913298 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
SOS1_NGEF_PH
PH_17
Motif
Other DBs
NCBI-GeneID:
120913298
NCBI-ProteinID:
XP_040179091
LinkDB
All DBs
Position
9:complement(35261972..35482484)
Genome browser
AA seq
2546 aa
AA seq
DB search
MANVSPELDNMEVQTPPNNNNRWDQAEHVWDETAASGKLFECSRIKALADERDAVQKKTF
TKWMNSHLSKVPCRVNDLYSDLRDGYIITKLLEVLSGEQLPKPTRGRMRIHSLENVDKAL
QFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALL
LWCQMKTAGYPEVNIQNFTTSWRDGLAFSALIHRHRPDIIDFSKLTKSNATHNLQFAFNT
AERQLGLIKLLDPEDVNTENPDAKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQAIAI
EKDIYRYEDLASELLEWIEKTISIITNQKFANSLLGVQQQLQAFTTYCTTEKPCKFQEKG
NLEVLLFTIQSKLREEKCKVYVQPEGKSISDINKAWTRLEKAEHDREVSLRNELIRQEKL
ELLSQRFDQKAAMREAWLSENQRLVSQDNFGYDQSAVEAAMKKHEAIEADISSYEERIQV
VADLAQEMESEGYYDICRISAQKDNILRQWNLLKDLLVSRRKRLERNLALQKIFQEMVYM
IDWMDEMQVPLSSKDFGKHLLEVEDLLQKHSLLEADIAAQTERVHSLNQGALKFTEYSDY
QPCDPQIICNRVEHVKSCLEDLRQQAEKRRGELEESKRLWCFLQEVEETEGWIREKEQIL
SVPQSYGKDLSSVLRFLSKHKIFVGELGGRHAILQQTLQKGDQVLSKRRRGMSGLRQRMQ
EVRQKWENLEKAANAHHLKLQEASNFHQFNADTMELAGWLQDSYRLVSSDDFGHDEYSTQ
SLVKKHRAATEEIEKHKATVLGLRKLLSELGTEYRNQVDVQISIVEVEQLFGEVVEVASL
RSQWLQDALDVYKMFGEVNSCEVWIDEKEQWLVKMDIPQRLEEVEVVQHRFESLDQEMNS
LMGRVLDVNQIVQQMLEGGHPSSSEVRACQDHLNSRWNRIVELVEQRKEQITAVLRLQNY
FLECNEVKSQIREKRKAMENSQCGSGELGGVLALQRKLSTMEAALVALEPKLVQLQQDAE
VLATCHPPQAMEVLVHFEEISGEWEALKRTIQGCEDSLTVASKLQQFIQDLDNFLTWLVK
TQTAVATEELPSNLSDAERLLGLHGSLKEEISRYEEDYNKIQAVSDLLSLEEADLPYLSL
QQWLQKLEVGWNKLLQMWENRREVLVQSHIFHLFLRDVKQAEACLNNQESALAHVEVPNT
VEGVEKAIKKHKDFLTTMEMNTQKVKIAVEAGESLIRLGNVFADRVQERIAAIQKRSQRN
MALAQKWLQRLKDHLQLQHFLQDCNELDTWISEKTLMARDNSRDVTQKLHKKWLKHQAFM
AELTQNKGWLDKIEKEGQHLIQEKPELAGVVKKKIEEIRQCWVELESTTHAKAQQLFQSS
KVDLVVQNYSDLGKRLFKLEEQLQPLEALPDFSTVNTHMKKLETMESQMEEWYKEVGELQ
AQIASLPMDVASQEAVDQKQNEVGTRIVRLIEPLKERRRILLASKEVHQVTRDLEDEITW
VQERLPLAAAKDHGSNLQTVQQLIKKNQNLRREIQVHTPRVDDILERASAIASIRSPEAE
GVRIGYDSLREMWGVLREEAERRQQLLDINYQVQQYYFDVGEVETWLSEQELLMMNDEKG
KDEQSTLQLLKKHLMVEQTIENYEETIAQLSRQCRNLLDLGHPDSEQISKRQSQIDRLYV
SLKDLVEERKGRLEQQYWLFQLSREVDELEQWIAEKEVVAGSPELGQDFEHVTLLQEKFT
EFISETGSIGQDRISAVNQMVDELIDYGHSDAATIAEWKDGVNESWADLLELMETRAQLL
SASHELQKFFNDCKEVLSQVEEKKQRIPEVKAQEARLSAGSLQRILSSFEHDIQVLVTQV
RQLQENAAQLRTVYAGENAAAIVTSEQEVMRSWKELLTTCEECRLQITTTSDRMKFLGLV
RDLISWMDSVICQIETEDKPRDVSSVEVLMSYHQGVKSEIEARNKRISDCVELGKSLVLN
KRPASEEIKQNLDRLMAKKKEMLDKWNKHWEWLQQMLEVHQFAQEAGVAEAWLTAQEPIV
KSPELGNSVDEVEQLIRRHEAFRKTAAAWEERFSSLRRLTTLEKMKAEQSKQPATPLLGR
KVFPDTTDFSPRPSPLVQQPFHEKSETKLEQKDTLAVPNGIPVESHRTRTERGEARVGYV
RQEIKPERLQPKMDHVEAKITEKIQPAQEGTRGEKGEIRFAQGMATLTVEKAESKSNRHG
ERRRDRHDRRLERQESSEQEVPKPEHQEERRRRDRHDKRLERQGSSEQETPKPEQTERRR
DRHERKAEKESSEQETPKNEPDKPGGKATLADIVEQLQEKEASQKDPANRDSPARLPNGV
EKLPERAPRPDRPRARDRPKPRRRPRPKDPNQAPGEARRSRSAPAQNNAPPPPPPTHTVQ
LEGYLFRKHELDGPSKKASNRSWVNLYCVLNKGDLGVYKDAKSQSSGATHGGEPLMTLHG
ASCEIANEYKKKKFVFKLRSTDGREFLFQSKDEEEMKNWITAISTCVSEHAEIAKWSQTL
LTTSSTDEGNIKRESDRRSSAGGRKK
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtgagcccagaactggacaacatggaggtacaaacgcccccgaacaacaac
aatcgctgggaccaggcagaacatgtgtgggacgagactgcggcctctggaaaactgttt
gagtgctcccggattaaagctttggctgatgaacgtgatgctgttcagaagaagaccttc
accaagtggatgaattctcatctctcaaaagtaccgtgtcgtgttaatgacctgtacagc
gatctgcgggatggttacatcatcaccaaacttctggaggtgctgtctggagagcaactg
cctaaacctacccggggccggatgagaattcactctctggagaatgtggacaaagctctc
cagtttctcaaggagcagcgggtccatctagagaacgtgggctcacatgatatcgtagac
ggcaatcaccggcttaccctgggccttatctggactattatcctccgtttccagatccaa
gttatcaagatagaaacagaagacaatcgcgagacaaggtcagcaaaggacgccctcctc
ctgtggtgccagatgaagactgcgggctatcctgaggtcaatatacagaactttaccaca
agctggagagatgggctggccttcagtgctctgatccacagacacagaccggatataatt
gatttcagcaagttgacaaagtcaaatgcaacccacaacctccagttcgcatttaataca
gccgagcggcaactgggtctgatcaaacttttagacccggaagatgttaacacagagaat
ccagatgcgaaatccatcataacctacgtggtgtccttttatcactacttctccaagatg
aaggccttagctgttgagggcaaacgtattggaaaggtgctcgatcaggctatcgccatt
gagaaggacatctatagatatgaagatttggcatcagaacttttagaatggattgagaaa
acaatatcaatcatcacaaaccagaaattcgccaactccttactgggcgtccagcaacag
cttcaggcattcaccacgtattgcaccaccgagaaaccatgcaaattccaagagaaggga
aatttggaggttcttctcttcaccattcagagcaagctgagggaggagaaatgcaaagta
tatgttcaacctgaaggaaaatccatatctgatattaacaaggcttggacacggctagag
aaagctgaacatgacagagaggtctccctgcgcaatgagcttatccgtcaagagaagctg
gagctgttgtctcagagatttgatcagaaggctgccatgagagaggcatggcttagtgag
aaccagcgtcttgtgtcccaggataatttcgggtatgaccagtctgcagtggaggctgcc
atgaagaaacacgaggccattgaggctgatatttcctcctatgaggagcggatccaggtg
gtggcggacctggcccaggagatggagtcagagggatattatgacatctgtagaatatcg
gctcagaaggacaacatcctgagacagtggaacctactgaaagatttgctggtgtcccga
agaaagaggctggaacgtaacctggccctgcagaagatatttcaggagatggtgtacatg
attgactggatggatgagatgcaggttccgttgtcatctaaagactttggaaagcatctg
ttagaagtagaagatttgctgcaaaaacacagcttgctagaggctgacatcgctgcccaa
actgaaagagtccactccctaaaccagggagccctaaaattcactgaatattcagattac
cagccatgtgaccctcagatcatctgcaaccgagtcgagcacgtcaagagctgtttggaa
gatcttcgccaacaggcagagaaacgtcggggagagctggaagaatccaagcgtctctgg
tgtttcttacaggaggtagaggagactgagggttggattcgagagaaagaacagattctg
tcagttccacaaagctatgggaaggatctgagcagcgtcctacgtttcttaagcaaacat
aagatttttgtgggggagctcggagggaggcacgccatactacagcagacccttcaaaag
ggggatcaggtgctcagtaaaaggagaagaggaatgtctggacttcgccagcgaatgcaa
gaagtaagacaaaaatgggagaaccttgagaaagcagcaaatgcccaccaccttaagctc
caggaggcttccaacttccaccagttcaatgcggacactatggagcttgctggttggctg
caggatagctatcgcctggtgtccagcgatgactttggacacgatgagtattccacccag
tctttggtcaaaaagcatcgcgcagccacagaggaaatagagaaacacaaagctactgtg
cttggcttgaggaaactgttgtctgaactgggtactgagtaccgaaaccaggtggatgta
cagattagcattgtggaggtggagcagctctttggagaggtggtggaagtggcctcattg
agaagtcagtggcttcaggatgctttagatgtttataaaatgtttggtgaagtaaactcc
tgtgaagtgtggatcgatgagaaggaacagtggctggtgaagatggacatcccacagaga
ctggaagaggttgaggttgtccagcacaggtttgagagcctggaccaggaaatgaacagt
ctaatgggccgggtgttggatgttaatcagatagtgcagcagatgctggaggggggacat
cccagttcctccgaggtccgagcctgtcaggatcacctaaacagcaggtggaaccgaatt
gtggaattagtggagcagaggaaagaacagatcactgctgtgcttcgcctgcagaattat
ttcctagagtgcaatgaagtgaagtctcagatccgtgaaaagaggaaagctatggagaac
agccagtgtggcagtggagagttgggtggggtgctggccttgcaaaggaaactttcaacc
atggaggcagcattggtggctttggaacccaagctggtccagctgcagcaagatgctgaa
gttctcgccacatgccacccacctcaggccatggaggtgttggtacactttgaagaaatt
agcggagagtgggaagctctgaagaggactatccaaggatgtgaggactctctaacagtg
gccagcaagttgcagcagtttatacaagacctggacaacttcctgacctggttggttaag
acacaaactgcagtggctacagaggagttgccttccaacctgtctgatgctgagagattg
ttaggacttcatggttcccttaaagaggagatcagtagatatgaggaagactacaacaag
atccaggctgtcagtgaccttctgagcctagaagaggctgaccttccatatctctctctc
cagcagtggttgcagaagctggaagttggatggaacaagcttctccagatgtgggagaac
agaagggaggtccttgtgcagtcccacatcttccatctgtttttaagagatgttaaacag
gctgaggcttgcttgaacaaccaggagtcagccctggctcatgttgaggtgcccaacact
gtagaaggggtggagaaagccatcaagaagcacaaggatttcctgaccaccatggagatg
aacacacagaaggttaagatagcagtggaagctggggaaagcttgatacgacttggaaat
gtgtttgctgaccgtgtccaggagcggatcgcggcaatccagaaaaggagtcagcgtaac
atggcgctcgcacagaaatggctacagagattgaaagatcatttgcaacttcaacacttt
ctgcaagactgcaatgagctggatacctggatcagcgagaagacactgatggcgagggat
aactcgcgggacgtgactcagaaactccataaaaaatggctcaagcaccaggcgtttatg
gctgaacttactcagaacaagggttggcttgacaagatcgaaaaggaaggtcaacatttg
attcaggagaagccagagctggccggggtggtaaagaagaagattgaagagatccgtcag
tgttgggtggagctggagtccactacccacgccaaagcacagcagctcttccaatccagt
aaagtggacctggtagtacaaaattattcagacttgggaaagagactcttcaagttagaa
gagcaacttcaaccattggaagctttaccagacttttccacagtcaacacgcatatgaaa
aagcttgagacaatggagtctcagatggaggaatggtacaaggaggtgggcgagctacaa
gcgcagattgcatctcttccaatggatgtggccagccaagaggcagtggatcagaagcag
aatgaagtcggaaccaggattgtgcggctaattgagccactaaaagagagaagacggatt
cttctggcctctaaagaggtccatcaagtcacccgggacctggaagatgaaattacctgg
gtacaggaaaggctgcctcttgctgcagctaaagaccatggaagcaacttgcaaactgtg
cagcagctcatcaagaaaaaccagaacctgcggcgagagatccaggtacataccccgcga
gtagacgacatcttggagagagcatcggccattgccagtatccgcagtccagaggcagag
ggagtccggataggatatgatagcctacgggagatgtggggtgtgctgcgggaggaagct
gaaaggcggcaacagcttttagacatcaattaccaggtgcagcagtattactttgatgtg
ggtgaagtggagacgtggctgagcgagcaggaacttctcatgatgaatgacgaaaaggga
aaggatgagcagagtacgttgcagctcttgaaaaagcacctgatggtggaacagaccatt
gagaactacgaggaaaccattgctcagctgtctcgccagtgccgtaacctcttagaccta
ggtcacccggacagtgagcagataagtaagcggcagtctcagattgatcggctctacgtg
tctctgaaggacctggtggaggagcgcaaggggcgcctggaacagcagtattggcttttt
cagctgagccgcgaggtggatgagctggagcaatggattgcagagaaggaggtggtggcc
gggtctccggagctgggccaggattttgaacatgtgacacttcttcaggagaagttcaca
gagtttattagtgagacaggcagtataggacaggaccgcatctctgctgtgaatcagatg
gtggatgaactcattgactatggccactcggatgcagctaccatagcagaatggaaagat
ggcgtgaatgagtcctgggcggacttgctggaactgatggagacaagagcacagttgctg
tctgcttctcatgaattacaaaagttctttaatgactgcaaagaggtcctgtcccaagtg
gaagagaagaagcagaggatcccagaggtgaaggcacaggaagctcgcctctcagctggt
tcactgcagcgaattcttagctcttttgaacatgacattcaggtccttgtcactcaggta
cgacagctgcaggagaatgctgcccagctgcgcacagtatatgcgggagagaatgcggct
gccattgtcaccagtgagcaggaagtaatgcgttcctggaaggagttactaaccacctgt
gaggaatgcaggctgcagatcaccactaccagtgaccgcatgaagttcctgggtcttgtg
agggacctgatctcctggatggacagtgttatctgtcagattgaaacagaagataaaccc
agggatgtgtcttccgtggaagttctcatgagttatcatcagggagtaaagagtgaaatt
gaggcaagaaataagagaatctcggactgcgtagagcttggaaagtccttggtcctaaac
aagaggccggcgtctgaagagattaagcagaacctggacaggttgatggcaaagaagaag
gagatgctggacaaatggaacaaacactgggaatggctgcagcagatgctggaagtgcac
cagtttgcccaggaagccggagtagctgaggcctggctgactgctcaggagcccatagtg
aagagcccggagctggggaacagtgtggacgaggtggagcagctgatcagacggcatgaa
gctttccgtaaaactgcagccgcctgggaggagaggttcagctcattgaggcgcctcact
acactggagaagatgaaagctgagcaaagcaaacaacccgcaactccgctccttggccga
aaagttttcccggacaccacagacttttcacctcgaccatcacctcttgtccaacagcca
ttccatgaaaagtctgagactaaactggagcagaaggacactctagctgttcctaatggg
atccctgtggagagtcacagaacacggacagagaggggagaagcaagggtagggtatgtg
cgtcaagagataaagccggagagacttcagccaaagatggatcatgtggaggccaagata
actgagaagattcagcctgctcaggaaggaacccgtggggaaaaaggagagatcagattt
gctcaaggtatggccactttgactgtggagaaagcagagagcaagtcgaatcgtcatggc
gagcggagaagagataggcatgatcgtaggctggaacgccaggagtccagtgagcaggag
gttcccaaaccagagcatcaggaggaaaggaggagacgagaccgacacgacaaaaggctg
gagagacaggggtccagcgaacaagaaacaccaaaaccggagcagacagaaaggaggaga
gatcggcatgagaggaaggcagagaaggagtccagtgagcaggagacgccaaagaacgag
cctgacaaaccaggaggaaaggcgacacttgccgacattgtagaacagctacaggaaaaa
gaagcatcacagaaagaccctgcaaatcgggattctccggcccgcttacccaatggcgtg
gaaaagcttccagaaagagcgcctaggcctgatcggccaagagcaagagatcgacccaaa
cccagaagaagacctcgtcctaaggacccaaaccaagcaccgggggaggcccggagatcc
cgctcagctccagcgcagaacaatgcccctcctccacctcctccaacccacacagtacaa
ctggaaggatacctcttcagaaaacatgagctggatggacccagcaaaaaagcctcaaac
aggtcctgggtaaatttatactgtgtgctgaacaaaggggacttgggggtctacaaggat
gcaaaaagtcaaagttcaggagcaacacacggaggggaacccctaatgactctacatgga
gcttcctgtgaaatagccaatgagtataagaaaaagaagtttgtcttcaagctcaggtcg
acagatggaagagaattcctctttcaatctaaagatgaggaggaaatgaaaaactggatt
acagctataagcacttgtgtttctgaacatgccgagatagctaaatggagccagaccctt
cttactacctcctccaccgatgaaggaaatatcaaacgagagtctgatcgcagatccagc
gccgggggccgtaagaagtga
DBGET
integrated database retrieval system
