KEGG   Rana temporaria (common frog): 120913501
Entry
120913501         CDS       T07929                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
rtem  Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtem03400]
    120913501 (MDC1)
DNA repair and recombination proteins [BR:rtem03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    120913501 (MDC1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT Yop-YscD_cpl PTCB-BRCT
Other DBs
NCBI-GeneID: 120913501
NCBI-ProteinID: XP_040179406
LinkDB
Position
9:52824495..52894981
AA seq 2460 aa
MDLTQRLDWEDEVEETAVERHKPVGNLHMFAGTHGPAQDYPIYQGPNVIGRHSSCDITLP
AQSVSKKHAVLCVTGDCHTICDNGSLNKTRRSKMALEPDVRYSLSTGDFLLFADVACRYT
ILKKIEAETTIAEDSEDDSMLVPGTQAPLVIEKTPGAAIRRMGCGAVLARDSGDEDEEVR
RGWSDGGEGGSKDALRTSRPAAGAFFSPDADADTVVPESDEENDTSSSGTRFTSLHLHCD
SDIDNRGTPTKESSFITSSLDKFTPAAVKEPAKEESSRLLQTNKDEKPVGEQTDEEKELS
SVGRDVVSDGELLEERKETSKDGAGDRSPCLGGTVVQKDTLDCGLKDGGTKAINRSNSHE
DKNLKNNAASIENLEVSSTSSHRLKDNDDETSRRDIAATTAIESTQEEDNLKSTEEKLKV
AADLCLDSDTDSDEDVPTTSGTDVKKKDDPEIKSDKAPEQSSVDGTSDAGVHMDRDTSVD
EDKEKISAVEHGGVGEINIDSDTDVEDDKEMSETGDGNSGEVHKVHSVSGTNVSTGFDID
SDTDVEDADITRSDGKVEEKKEKFHLDSDTDEEDNGDVSSTKVRKGDLDSVAVVLLKETK
DEIHMDSDTDVEEDVNVSSTDVTKGKQTLNIAAQEGFHVDSDTDVEDVDVSSTVVTKEKQ
DFSKSVKTARDGLPLDSDTDVDEEDQGPGPSSAAVQSRTTESHIDELQFEMVKNEKKAVS
VINKDAADLHFDSDTDDDDGTSTEPKQAGGSVKTDAEKNKTEVANEADALHIDSDTDEDD
GTSTGPKKAGGSVKTDAEQNEAEAANEADALHMDSDTDLDEDDASMIINKPQTAETAEGE
LHSDGVSEGGDKNLVEVAGSSVGVMGEVPKADTSTGSVKSNEVEAPKADSQGADYELMAT
QCFLEEPQEPEEDLPDEEEATQAYILSSTWAEPHTFKRPSDPVGVLQISAVTLDKSEEEV
DENAIAETQLFCFGVDQSPGSDFKETPQLEEQVMDNQQDTQPTSSVEGSRQKDQEPPHGE
MIQEDTEPVSQCLSANPPADTGTLLHLKRDVPAAVWMKGLQQQLETSDVKEDSTPEDLTE
DEQDLPPLELEATQSFILEVPNIQEHRKEHHDPSSLAVHVDTKLAESAEPATENPPKDPI
ALGPGVDVSATEILPTGLSIPERDASPVPSTESTPTGPSTLELANESPLTESSNLETGIS
AASLTEGPPTELSNLELDVSAVPATEIPPTELSNLELDVSAVPATEIPPTELSNLELDVS
AVPATESPPNELSNVEKEVNEDDATQAYSLNLPVSDANVPQSNLEVHSTEDATQPCSSDV
ASIASKEAQSTGVSMLAVGEKETELTDTGKGKPSSKRGLSRSRKKEQPERSTEISNEKAQ
LSEQAAPAAHSAPEETAELRAGELGQSGPRNVASETRRKTSTEDSGKLTENTEVEEEQSE
GTKKIADEETSRKGRTSRASAKEEPPQVSTPVANRKRGQALKADVNLKRKKSDETSEAEE
VRPAGRRGRPRKLSTTDDSQTSAGGSRISNEKAQLSEQAAPAAHSAPEETAELHAGELGQ
SGPRIVASETTEEIEPEKDGRRRGRRKATEDSETKAKTKNELVVPTASRKRSSRIALEAE
PSTSGNNEISRKQPNRKSIVKMQEEEKQDESKKDFGSASEKCKKSDVFETLSDNHPEKIG
LRSEFENVTGPTSMELIVGQMESDQERDVTSTLLESNRDKKVSTSSNNTEKNESTIVDLP
EQLETISAPQNKKPVRGKRQAATKAKQDNTQETISNDKTESETSGTNLETQDDFKIPTPR
TNDLQDGGNKGPRGRRTRTSHISTSELLEHEKPKGADTKASQNEEANKTSPGDQNSADTR
STRQRRNVKEEAKEDLQKEEQIGRSKRTINLGGNQKNKETNSERTLEDNLGRSSLPKRTR
KNSKEETPKPEPDVPEVEKIEEDNMAKLPRRTRKGYKEEQKLEENKGSLESSNTAEAQTT
KRTQRSSKGQDIVDEETVKETVTRKGRNSKSEDAQLGEDQGKRSVRTRRLSKEEVVEETT
TDTTKENAAGQNTSRRTRRNVKADEKTESEHAGDIIPDKELSQSERSSSRTRRKTSTEDS
GKLTENTEVEEEQSEGTKKIADEETPRKGRTSRASAKEEPPQVSTPVANRKRGQALKADV
NLKRKKSDEISEAEEERPAGRRGRPRKLSTTDDSQTSAGGSREMSTPEPSPSRSSRLRQS
PALSNLPEVLTPRRTGRLSVSTLTASPYIPQSGAPPKVLFTGVVDAMGEEIIRSLGGDIA
DSVFDCTHLITDRVRRTVKFLCALARGIPIVTLDWIDKCKKSGCFLSHTKYLVKDKEQEK
NFNFVLSQSLQKAKRSPLFEGYDIHITPSVKPDPESMKDIVCCSGANFLPKMPRTFKEKC
VIVSCPEDAARCKSVPSKIPVTTAEFILSGILRQEVNPSAYLLSSEMEEDNAPAPAKRRR
NT seq 7383 nt   +upstreamnt  +downstreamnt
atggatctgacacagcgcttggattgggaagatgaagtagaggagactgcggtagaaaga
cacaaacctgtcggaaacctgcatatgtttgctgggactcatggacctgcacaggattac
cccatctaccaaggccccaatgtcattgggcgtcactccagttgtgatatcaccctgcca
gcccagtctgtgtcaaagaaacatgccgtcttgtgtgttactggggactgtcataccatc
tgtgacaatggcagcctgaacaagactcggcgcagcaagatggccctggagccagatgtg
cgctactctttgtctactggggactttttgcttttcgctgatgtggcttgtcgatacacc
atactgaaaaaaattgaggcggagactaccatagcagaagacagcgaggatgactccatg
ttggtacctggaacgcaggcaccattggttattgaaaaaactccaggtgcagctatacgg
cggatggggtgcggtgctgtgctggcgagggattccggagatgaagatgaggaagtacgg
agagggtggagtgatggcggtgaaggaggatccaaagatgctctgagaacatcaagacct
gcagctggagcctttttctctccggatgctgatgctgacacagtcgtgcctgaaagtgat
gaggagaatgatacgtcctcttccgggacgcgcttcacatctcttcacctgcattgtgac
agtgacatcgacaaccgcgggactcccacaaaagaaagctcctttataacctcttcattg
gacaaattcaccccagcagctgtgaaagaaccagcaaaggaggaaagcagtaggttgtta
caaacaaacaaagatgagaagccagtcggagaacagacagatgaagaaaaagaattaagc
tcagtggggagagatgtggtctctgacggtgagcttttagaagagagaaaggagacaagt
aaggatggagcaggtgaccgatcaccttgtctaggtgggacggttgtacaaaaagatacc
ctagactgtgggttaaaagatggaggaaccaaagctattaaccgcagcaatagtcacgaa
gacaaaaacttgaagaataatgcagcaagtattgaaaatcttgaagtgtcctcaactagc
agtcaccgtttaaaggacaatgacgatgaaacttcaagaagggatattgcagcaactact
gctattgaaagcacccaggaagaggacaacctcaaatctacagaagaaaaactaaaagta
gcagccgacctttgcttagacagtgacacagactctgatgaagatgttcctacgacttct
ggaactgatgtaaagaaaaaggatgaccctgaaatcaaatctgataaagcaccagagcaa
agtagcgttgatggaacctctgatgctggtgttcacatggatagggacaccagtgttgat
gaggataaagagaaaatctcagctgtagagcatggaggggtgggtgaaattaacattgac
agtgatacagatgtagaggacgataaggagatgtcagagactggagatgggaactctggt
gaagtccataaagtacattccgtttcagggacaaatgtatctaccggctttgatattgac
agcgatacggatgttgaagatgcagatataaccagatctgatggaaaggtggaagagaaa
aaagagaaattccatctggacagtgacacagatgaagaggacaatggtgatgtctccagc
acaaaagtgaggaaaggtgacttggattctgttgcagttgttctgttaaaagagactaaa
gatgaaatccacatggacagtgacacagatgtggaggaagacgtcaatgtctctagtaca
gatgtcaccaaaggaaagcagaccttgaatatagctgctcaggagggtttccatgtagac
agtgatacagatgtggaagatgttgatgtctccagtacagtggtcaccaaagagaaacaa
gactttagcaaaagtgttaaaactgcaagagatggtctccccctggacagtgatacagat
gtggatgaagaggaccaaggaccgggaccctccagtgctgctgtgcaaagcagaacaaca
gaaagtcacatagatgaactacagtttgagatggtaaaaaatgaaaagaaagcagtaagt
gtgataaacaaagacgcagcagacctgcacttcgatagtgacactgatgacgatgatggg
acatccacagaaccaaaacaagcaggaggatctgtaaaaaccgatgcagagaaaaataaa
acagaggtagcaaatgaagcggatgctttacacatagatagtgacactgatgaggatgat
gggacatccacaggaccgaagaaagcaggaggatctgtaaaaactgatgcagaacaaaat
gaagcagaggcagcaaatgaagcagatgctttacacatggatagcgacacagatttggat
gaggatgatgcaagtatgataataaataaaccccaaacggctgaaacggctgagggagaa
ctccacagcgatggcgtttcagaaggaggtgataaaaacttagtcgaggttgcaggatca
tcagttggtgtgatgggtgaagttcctaaagcagatactagtactgggtctgtgaaaagc
aatgaagtggaggctccaaaagctgactctcaaggtgctgactatgagttaatggccaca
cagtgcttcttagaagaaccacaggaacctgaggaagacttgccagatgaagaggaagcc
acgcaggcatacatcctgagttccacatgggcagagccacatacatttaaacgtccttca
gatcctgtaggagttctgcagatctctgctgtaacattggacaagtccgaggaggaggtt
gatgaaaatgccatagccgagactcagctgttctgttttggggtggaccagtcaccgggt
tctgacttcaaggagactcctcaacttgaagaacaagtcatggataaccagcaagacact
caacctaccagtagtgtagagggatcaaggcagaaggatcaggagccacctcatggagaa
atgatacaagaagacactgaaccagtctctcagtgtttgtcagctaaccctccagctgat
acagggactttgttacacctgaaacgagatgttccagctgcggtttggatgaagggcctt
cagcaacaacttgagaccagcgatgtgaaagaggattcaacgccagaggatttaacagaa
gatgaacaggacctaccaccactggagctggaagccacacagtccttcatcctagaggtt
ccgaacatacaggaacaccgcaaagaacaccatgacccatcctccctagctgtccatgta
gacactaagcttgctgaatcagcagagccagcaacagaaaacccacccaaagacccaatc
gcccttggaccaggtgtagatgtgtcagcaacagagatactacccacaggactaagcata
cctgagagagatgcatcaccagtaccatcaacagaaagcacgcccacaggaccaagcaca
cttgagctagcaaacgagagcccactcacagaatccagcaaccttgaaacgggtatatct
gcagcgtcattaaccgaaggcccacccacagaactgagcaaccttgaactagatgtatca
gcagtgccagcaactgaaatcccacccacagaactgagcaaccttgaactagatgtatca
gcagtgccagcaactgaaatcccacccacagaactgagcaaccttgaactagatgtatca
gcagtgccagcaactgaaagcccgcccaacgaactgagcaacgtggagaaagaagtaaat
gaggatgatgccacccaagcctacagtctaaaccttccagtgtctgatgctaatgtccct
caaagcaacctggaagtacattccactgaagatgccacccagccctgtagctcagatgtg
gcgtccatagcaagtaaagaagcacagtctactggtgtttctatgttggctgtgggggag
aaggaaactgaattgactgacacaggaaaaggaaagccatcttctaaaaggggtctgagc
agaagtagaaaaaaggagcagcctgagaggagtacagagatttcaaatgaaaaagctcag
ctgtcagagcaagctgctcctgcagcgcattcagcaccagaagaaacggctgaattgcgt
gcaggtgaattgggacagtctggacccaggaatgtggcctctgaaacgagaagaaagacc
tcaacagaggatagtggaaagctgacggaaaacacagaggtggaagaggaacaaagtgag
ggtacaaagaagatagcagatgaagagacctcaaggaaaggaaggacaagtagagcatca
gccaaagaggagcctccccaggtgtccacccctgtggctaacagaaagagaggacaagct
ttaaaggcagatgttaatctcaaaaggaagaaatcagatgaaacatcagaagccgaagaa
gtaagaccagcaggcagaagaggaagaccacgaaaattgagtacaacagatgactctcaa
acaagtgctggtggcagcaggatttcaaatgaaaaagctcagctgtcagagcaagctgct
cctgcagcgcattcagcaccagaagaaacggctgaattgcatgcaggtgaattgggacag
tctggacccaggattgtggcctctgaaacgacggaggagattgagccagagaaagatgga
agaagaagaggaaggagaaaagcaactgaagattctgaaaccaaagctaaaacaaagaat
gaattggttgtcccaacagcatctcgaaagagatccagcagaatagccttagaggctgaa
ccatcaacatcaggaaataacgagataagcagaaagcaaccaaataggaaaagtatagtt
aagatgcaagaagaagaaaagcaagatgaatctaaaaaagactttggctcagcctctgag
aagtgtaagaagagcgatgtctttgaaaccctttcagataatcaccctgagaagataggg
ctaagatcagaatttgagaatgtgactggacctacatccatggagctaattgtaggtcaa
atggagagcgaccaagaaagagatgttacctcaacgttattggagtctaatagggataaa
aaagtctcaacgtcttccaataatactgaaaagaatgaatccacgattgtggacctccca
gaacagttagagactatttctgctcctcagaacaagaagcctgtcagaggcaaaagacaa
gccgctaccaaagcaaaacaggataatacacaagaaaccatatccaatgataagacggaa
tctgaaaccagcggtactaatttggaaacgcaagatgacttcaagattccaaccccaaga
accaatgacttgcaagatggtggaaacaaaggtccaagaggcagaagaacaaggacttcc
catatttccacttcagagcttttggaacatgagaaacctaaaggggcagacacaaaagca
agccaaaatgaagaagccaataaaaccagtccaggtgatcaaaattctgcagatacaaga
tcaacaaggcagcggaggaacgtgaaggaagaagctaaagaagatttacaaaaagaagag
caaatcgggagatccaagcgtaccataaatttaggaggcaatcagaaaaataaagaaaca
aacagtgaacgcactttggaagacaatttaggaagaagctcacttcctaaaagaacacga
aaaaattccaaagaggaaacgccaaaaccagaaccagatgtaccagaagttgaaaagatt
gaggaagataacatggcaaagctaccaagaaggacacgaaaaggctacaaagaagagcag
aaattggaagagaataaaggaagtctggagagttcaaacacagctgaagcccaaacaaca
aaaagaacacaaagaagtagcaaggggcaagatattgttgatgaagaaactgtgaaagaa
accgtcaccagaaaagggagaaattcaaaatcggaagatgcacaattaggagaagaccaa
ggcaaaagatctgtgaggacaagaaggctctcaaaggaagaggtagttgaagagaccact
acagataccactaaagaaaatgcagctggacaaaacacctctcgaagaacaaggagaaat
gtgaaagcagatgaaaaaactgaaagtgagcatgcaggagacattataccagataaggag
ctttcacaatctgaaagatcgtcctcaagaacaagaagaaagacctcaacagaggatagt
ggaaaactgacggaaaacacagaggtggaagaggaacaaagtgagggtacaaagaagata
gcagatgaagagaccccaaggaaaggaaggacaagtagagcatcagccaaagaggagcct
ccccaggtgtccacccctgtggctaacagaaagagaggacaagctttaaaggcagatgtt
aatctcaaaaggaagaaatcggatgaaatatcagaagccgaagaagaaagaccagcaggc
agaagaggaagaccacgaaaattgagtacaacagatgactctcaaacaagtgctggtggc
agcagggaaatgtcaactcctgaaccgtccccatcccgcagcagccgtctgaggcagagt
ccagctttaagtaaccttccagaagtcctaactccgagacgcactggcagattgtctgtg
tccactttgactgccagtccctacattcctcagtctggagcaccgcccaaggtcctgttc
acaggggtggtggatgcaatgggtgaagagataatccgctcgttgggcggagacattgca
gactccgtatttgattgcactcacctgataacagaccgcgtccgaagaaccgtgaaattc
ctctgcgcacttgcgaggggcatccctattgttacactggactggatagacaagtgtaag
aagagcggctgtttcttgtctcacacaaaatatctggtgaaagataaagaacaagagaag
aatttcaactttgtactgtcgcaatctctgcagaaagccaagagaagtccactgtttgag
ggctacgatattcacatcacccccagtgtcaagccagatcccgagtcgatgaaggatata
gtttgctgcagcggggcaaatttccttcccaagatgccccggacatttaaggagaagtgc
gtcattgtgtcgtgcccagaagatgcagcgcggtgcaagtcggtgccatcgaaaatacca
gttactacagccgagtttattctaagcgggatattgcgccaggaagtcaatccaagcgcc
tacttgttgagcagtgaaatggaggaggacaatgcaccagctcccgccaaacgtagacgc
tga

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