Rana temporaria (common frog): 120913535
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Entry
120913535 CDS
T07929
Name
(RefSeq) zinc finger FYVE domain-containing protein 1-like
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120913535
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtem01009
]
120913535
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120913535
03029 Mitochondrial biogenesis [BR:
rtem03029
]
120913535
Protein phosphatases and associated proteins [BR:
rtem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120913535
Membrane trafficking [BR:
rtem04131
]
Autophagy
Other autophagy associated proteins
Others
120913535
Mitochondrial biogenesis [BR:
rtem03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
120913535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
GBP
MMR_HSR1
RHD3_GTPase
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
120913535
NCBI-ProteinID:
XP_040179456
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All DBs
Position
9:54711679..54746694
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AA seq
649 aa
AA seq
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MSAVLLGDPLTPKKAPTGEEEEFSFLLVDEEENLQVKDVADFIKRLGCSPQEPVKVLSIF
GNTGDGKSHTLNHMFYGGLEIFRTSPSQDSCTVGVWAAYYPELSLVLLDTEGLLGATDKQ
NQRLRLLLKVLAVSDLVIYRTRAERLHNDMFQFLGNASKAYLKFFTPELKALSSRCGLEV
TLSSLGPSLTIFQETSRTDLLGYGSKVRGQAETELLKRFHELGTPPEAFSSIHYVGTKTV
VPPTDFSQLMDRVKKQIMDTSTRSSRPLSHVFTALQSLSERFSGDIPDDQVHITSFFPDE
YFTCSLQCLSCRTRCKNRMNHMKDGVPHQADGLCKFAHEYNNKVFICKRCYEGGRELIVV
PKSVSSTDSPLMGLAKFAWSGYVLECRVCGIIYRSRQYWYGNRDPDGSVVRQEVRHVWSE
SDSYSLDQHNAAQRVLDGVNLVFQSVNEYSAGPTNMVTSWLIDNVAPTYWRPNAEITVCQ
GCKKEFTPTERKHHCRSCGEGFCHNCSNQTMPVPDRGWGPSPVRVCKQCHNKGPVKSQST
TQDDSKSLLPRKVTEIAQTSLDMVSSAMKYPLDFVKEAARPSYWVPDQEITNCHNCKKPF
THKMYKHHCRSCGQGFCQPCSEYQRPVPSRGWHHPVRVCQTCSLKKGEL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggtactgctgggggaccccctcaccccaaagaaggccccgacaggggaggag
gaagagttcagcttcctgctggtggatgaggaggagaacctgcaggtaaaagatgtggct
gactttatcaagagacttggatgtagtccacaggaacctgtcaaagttcttagtattttc
ggtaataccggagatggcaagtcgcacacactcaaccacatgttttatgggggtctggag
atcttcaggacctctccctcccaggattcctgcacagtgggggtatgggctgcatactac
ccagaattgtccttggtgctgctggatacagaaggtctcctgggggccacagataaacag
aaccagcgcctacgtctcctcctgaaggttctggctgtgtcagatctggtgatttataga
acaagggcagagaggttacacaatgacatgttccaatttttgggtaatgcctcaaaggct
tatttgaagttcttcacacctgagctaaaagccttatctagtcgctgtgggctggaggta
acactgtccagtcttggaccgtccctcacaattttccaagagacttctcgaactgatctg
ctgggttatggaagcaaggtccgcggccaggcagagacagaactactaaaacggttccat
gagttggggactcctcctgaagcctttagctcaatccactatgtgggaaccaagaccgtg
gtcccacccactgacttctctcagttaatggatagggtgaagaagcaaattatggataca
tccactcgctcatctagaccactgtcccatgttttcacagccttacagagtctaagtgag
cggttctctggggatattcccgatgatcaggttcacatcacctctttctttcctgatgaa
tactttacttgttccctgcagtgcctcagttgcaggacacgctgcaagaacaggatgaat
catatgaaggatggcgtccctcaccaggcagatggtttgtgcaagtttgcccatgaatat
aacaataaagttttcatctgtaagcgatgttatgagggcggaagagagttgattgtagtc
cccaaaagtgtgtcgtccacggacagtcctttgatgggcctagcgaaatttgcttggtct
gggtatgtcttggagtgccgtgtttgtgggattatctatcgtagccggcagtactggtat
ggaaatagagatcccgatggatctgttgtacgacaagaagttagacacgtctggtcagag
agtgattcttactcactggaccaacacaatgctgcccagcgtgtgctcgatggagtgaac
ttagtcttccaatctgtgaatgagtacagtgccggccccaccaatatggtcacgtcttgg
ctaatagataatgtggctcccacctattggcgaccaaatgctgagattactgtgtgtcag
ggttgcaagaaagaattcacgcctactgagaggaagcatcattgccgatcatgcggagaa
ggtttctgtcacaattgttccaatcagactatgccggttcctgaccgaggctggggtcca
tcccctgtacgggtctgcaagcagtgtcacaataaagggcctgtgaaaagtcaaagtact
actcaggatgatagcaaaagtttgttacctcgcaaggtcacagagattgctcagacctca
ttggacatggtgtcttctgcaatgaagtatcctttggattttgtaaaggaagcagcacgt
cccagctactgggtgccagaccaggagatcaccaactgccacaactgtaaaaaaccattc
acccataaaatgtacaaacatcactgcaggtcttgtggccagggcttctgccagccttgc
tcagaatatcagcgaccggtcccctcacgggggtggcatcacccggtgcgggtctgtcag
acctgcagccttaaaaagggagagttgtga
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