Rana temporaria (common frog): 120913662
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Entry
120913662 CDS
T07929
Symbol
FMR1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120913662 (FMR1)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120913662 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
120913662 (FMR1)
mRNA cycle factors
Stress granule specific factors
120913662 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
KH_2
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
120913662
NCBI-ProteinID:
XP_040179726
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All DBs
Position
9:79634547..79712826
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AA seq
575 aa
AA seq
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MEELVVEVRGSNGAFYKAFVKDVHEDSITVTFENNWQPERQIPFHDVRFPPPSGYNKDIN
ESDEVEFLRVKGEDDFMVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTI
ERLRSVNPNKPATKNTFHKVKLDVPEDLRQMCAKESAHKDFKKAAGAFSVTYDSENCQLV
ILSVNEVTIKRANMLSDMHFRSLRTKLSLMLRNEEASKQLESSRQLASRFHEQFVVREDL
MGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARTYLEFAEDVIQVP
RNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENDKNISQEEGMVPFVFVGTKDSITNATV
LLDYHLNYLKEVDQLRLERIQIDEQLRQIGASSRPPQNRPDKEKGYLSEDCSGIGRGGRP
YNNRGRSRRGTGYASGTNSEASNASETESDHRDELSDWSLAPAEEDRDSYIRRGDGRRRG
GARGQGLRGRGGFKANDDQSRTDNRQRTSRDPKARTADGSLQIRIDCNNERSVHTKSLQN
TTVEGTRLRTGKDRIQKKEKPEAVDGQQIVVNGVP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaagtgcggggctccaatggagccttctacaaggcctttgtg
aaagatgtacatgaggattccattacggttacttttgagaataactggcaaccagaaaga
cagataccattccacgatgtaaggttcccacctccttcagggtataataaggacatcaat
gaaagcgatgaggttgagtttttgagggtgaaaggagaagatgatttcatggtttattcc
agggcaaatgaaaaagagccatgctgctggtggctagctaaagttagaatgataaagggt
gagttttatgtaatagaatatgcagcttgcgacgctacatacaatgagattgtcacaata
gaacgactgaggtctgtaaaccctaacaagccagcaacaaaaaacacatttcacaaagta
aagttggatgtacctgaagatctgcggcaaatgtgcgcaaaagaatctgcccataaagat
ttcaaaaaagccgccggagcattttcagtaacgtatgactctgaaaactgccagctagtc
atcctttctgttaatgaagttacaataaaaagggcaaatatgttgagtgacatgcatttc
cggagtctccgcaccaaactgtctctgatgctgcgaaatgaagaagccagcaagcaactt
gaaagctcaaggcagctagcatccaggtttcatgagcagtttgttgtacgagaagacctg
atgggcctcgctattggcactcatggtgcaaatattcagcaggctaggaaggttcctggg
gtgactgccatcgatttggatgaagatacatgcacatttcatatttatggggaggaccaa
gatgctgtaaagaaggccagaacctaccttgaatttgcagaagatgtcatacaagttcct
cgaaatttagtcggaaaagttattgggaaaaatgggaaactcatccaggaaatagtcgat
aaatcgggggttgttcgagttaggattgaggcagaaaatgataaaaatatctcacaagaa
gagggaatggttccatttgtttttgtgggtacaaaggacagtatcaccaatgcaacagtt
ctactggactatcacctgaactatttaaaggaagtagaccaacttcgtttggagcggatt
cagattgatgaacagcttcgacagatcggagctagctcaaggcctccacagaatcgtcct
gataaagagaagggttatctgagtgaggactgcagtggtattggaaggggaggacgtccc
tacaacaacagagggcgcagcaggcggggtacgggatatgcctcaggtacaaattctgaa
gcatcaaatgcatcagaaactgaatctgaccaccgagatgagcttagtgattggtccttg
gcaccagcagaggaagatcgggatagctacattcggagaggagatggaagaagacgtggt
ggagcacgaggccaggggctgagggggcgtggtggcttcaaagcaaatgatgaccaatct
cggacagacaacagacagcgcacttcaagagatcctaaagcacggacagcagatggctct
ctgcagatccgaatcgactgcaataacgagagaagtgttcacactaaaagcttgcagaac
acaaccgtcgagggcacccgacttcgcacgggcaaagaccgcattcaaaagaaagagaaa
cctgaggccgtggatggccagcaaattgtggtcaatggtgtaccataa
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