KEGG   Rana temporaria (common frog): 120913754
Entry
120913754         CDS       T07929                                 
Symbol
CUL4B
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03420  Nucleotide excision repair
rtem04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120913754 (CUL4B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120913754 (CUL4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rtem04121]
    120913754 (CUL4B)
   03400 DNA repair and recombination proteins [BR:rtem03400]
    120913754 (CUL4B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtem04147]
    120913754 (CUL4B)
Ubiquitin system [BR:rtem04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     120913754 (CUL4B)
DNA repair and recombination proteins [BR:rtem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      120913754 (CUL4B)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120913754 (CUL4B)
Exosome [BR:rtem04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120913754 (CUL4B)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 120913754
NCBI-ProteinID: XP_040179881
LinkDB
Position
9:complement(98104819..98188147)
AA seq 906 aa
MDGEADAPRLAPPADPQHPAQSLPAPELPAGTNQSGSSARERRRMRPARSGIMKDLAASP
SGLSSPNPPAQEVKAEGNSSSKKRKLNNSNSSDKDDLDSIAPQKNSSSSSSNHIQKKLRF
EDSLDFLGLDVKMAEESPSSSSCSSATPQPLRSKNLLISPVAAGHHANGLTKASPVSSFA
NSKPGSAKKLVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENL
CSYKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRGIF
LFLDRTYVLQNSMLPSIWDMGLELFRTHIISDQKVQTKTIDGILLLIERERNGEAIDRSL
LRSLLSMLSDLQIYQESFEHRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADR
VITYLDQSTQKPLIATVEKQLLGEHLTTTLQKGLNHLLDENRIQDLSLLYQLFSRVRGGV
QVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHVIDVCFMKNEKFVNAMKEA
FETFINKRPNKPAELIAKYVDSKLRTGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFY
KKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYMQ
NQNVPGNIELTVNILTMGYWPTYVPMEVHLPAEMVKLQEIFKTFYLGKHSGRKLQWQSTL
GQCVLKAEFIEGKKELQVSLFQTLVLLMFNEGEEFSFEEIKQATGIEDSELRRTLQSLAC
GRARVLIKNPKSKDVDDGDKFTFNDDFRHQLFRIRINQIQMKETVEEQASTTERVFQDRQ
YQIDAAIVRIMKMRKTLGHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPN
QYNYVA
NT seq 2721 nt   +upstreamnt  +downstreamnt
atggacggggaagcggacgcccccaggctggctcctcccgctgatcctcagcaccccgct
caatccctcccagcccctgaactccccgccgggaccaatcagagcggtagctcggcgagg
gaaaggcgacggatgaggcccgcacggtcgggcattatgaaagacctcgccgccagccct
tccggtttatcttcccccaaccctcccgctcaggaggtcaaggcagagggaaacagcagc
tccaagaagagaaagttgaataacagtaacagcagtgacaaggacgacttggactctatc
gcccctcagaagaactcctcgtcctcctcctccaatcacatacagaagaagctccgcttt
gaggacagcctggactttctaggactcgatgtgaagatggctgaggagtctccctcctct
tcctcttgttcttctgccaccccccaacccctgaggagtaagaacctgctcatctcccct
gtggctgctggccaccatgccaatgggctcaccaaagcctcccccgtctccagctttgcc
aacagcaagcctggctcagccaagaagttagtcatcaagaacttcaaagataaaccaaaa
ttgcctgaaaattacactgatgaaacctggcagaaactgaaagaagctgttgaagccatt
caaaatagcacttcaataaaatataacttagaggaattatatcaggctgttgagaacctt
tgctcttataagatctctgcaaacctctacaaacagttgcgacagatctgtgaggaccac
attaaagcacaaatacaccaattcagagaagattctttggatagtgttcttttcctaaag
aaaatagataaatgctggcaggatcattgccgacaaatgatcatgataagaggcatcttc
ttgttcctggatcgaacctacgtccttcaaaactcaatgttgccatctatttgggacatg
ggccttgagttgtttagaacccatataattagtgatcagaaagttcagaccaagacaatt
gatggtattctactgctaattgaaagagaaagaaatggtgaagccattgatagaagtctg
ttacggagtctcctaagtatgctgtctgacctgcagatttatcaagaatcatttgaacac
agattcttggaagaaacaaaccgtttgtatgcagcagaagggcaaagacttatgcaagaa
agagaggttccagaatatctccatcatgttaacaagcgcttagaagaagaggcagatcgt
gtcattacatatttagatcaaagcacacaaaaaccattaattgccactgttgaaaagcag
cttctcggagaacatctaacaacaactctacagaaaggtttaaatcatcttttggacgaa
aaccgaatacaggacctctccttattgtaccagctgtttagtagagtccgaggaggtgtg
caagtccttctacagcactggatcgagtacatcaaggcttttggtagcacaattgtgatt
aatccagaaaaggataagactatggtacaagaattacttgacttcaaagacaaagttgac
catgtgatagatgtctgcttcatgaaaaatgagaagtttgtcaatgccatgaaggaagcc
tttgaaactttcattaacaagcgaccaaacaaaccagctgagcttatagcaaagtatgtg
gattcaaaactacggactggaaacaaagaagctacagatgaagagcttgaaaagatgttg
gataaaatcatgatcatatttaggttcatttatggaaaagatgtctttgaggccttctac
aaaaaagacttggccaaaaggctgttggttgggaaaagtgcttctgtggatgctgaaaaa
tcaatgctttctaaacttaaacatgaatgtggagcggcctttaccagcaagcttgagggg
atgttcaaagacatggaactgtcgaaggatattatggttcactttaagcagtacatgcag
aatcagaacgtccctggtaacattgaattaactgtgaatatccttacaatgggttactgg
ccaacatatgtgcctatggaagttcacctacctgctgagatggtgaagctccaggagatt
ttcaagaccttttaccttggaaagcacagcggcagaaaactacagtggcagtcaactctg
ggccagtgtgtcttaaaagcagagtttattgagggtaaaaaagaactgcaggtctcgctc
ttccaaacccttgtattgcttatgttcaatgagggagaagaattcagctttgaagaaatt
aaacaagcaactggcattgaggatagtgaattaagaagaacgctccagtcattggcttgt
ggaagagccagagtccttattaagaatccaaagagtaaagatgtagatgatggtgacaag
tttactttcaatgatgacttcaggcatcagctcttcagaataaggatcaatcagattcag
atgaaggaaacggtggaagaacaagccagcactacagagcgagtatttcaagaccggcaa
taccaaattgatgcagccattgttagaatcatgaagatgaggaaaacacttggccacaat
ctcttggtgtcagaggtgtacaaccagcttaaatttccagtaaagcctgcagatctcaag
aaaagaatagagtcattaatagacagggactacatggaaagggacaaggagaacccaaac
cagtacaattacgttgcctaa

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