KEGG   Rana temporaria (common frog): 120913780
Entry
120913780         CDS       T07929                                 
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
rtem  Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rtem04121]
    120913780 (RLIM)
Enzymes [BR:rtem01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120913780 (RLIM)
Ubiquitin system [BR:rtem04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120913780 (RLIM)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING-like zf-RING_16 zf-RING_4
Other DBs
NCBI-GeneID: 120913780
NCBI-ProteinID: XP_040179919
LinkDB
Position
9:complement(101418821..101471303)
AA seq 695 aa
MESTDSTGKGNAEQSDSQRQSQMDRLDREEAFYQFVNNLNEEDYRLMRDNNLLGTPGEIT
KEELLRRLQQIREGPPPPNSDENRGENAEDSSNGDSIIDWLNSVRQTGNTTRSGQRGNQS
WRAVSRTNPNSGDFRFSLEINVNRSTGNQNLPPGEQSEGSGVENMELANQGEAEAEPEPV
TETVTEPVTETVTEPVSETVAETVTEPVTEPVTVPVPEPVPMPEPVPVPEPEPEPEVEAE
PEIVTTGGTVETVVEEPIPQRGQRRARSRSPELRRIRSRYDRSRSPLNPAVEVPIRRAQH
NSSQTVDPSPVEPEGSSRTRQLVTAYLSNSATETEGSSRTRQHVTSRQQALVVDPPSAST
VVSNSETNSPQPPPAETPENAEATGTGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSR
SQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTML
RQIMTGFGELSYFMYSDNDAEPGTPAAGSPPVATGVEMQNNAAAAAAAAAVAAAAATPPR
APAPEPAEPPPVPPIPPVPPVPPMEADNGSNDVSTSGTRREIRNNRGSVTFEESGSLPFL
RLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNYGENDALKTCSVCITEYTEGNKLRKLPCS
HEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq 2088 nt   +upstreamnt  +downstreamnt
atggagagtaccgattctaccgggaaaggaaatgctgaacagtcagattctcaacgccag
agtcagatggaccggttggacagagaggaagctttctatcagtttgtaaataatttgaat
gaagaggattaccggctcatgagagataataatttattaggaactccaggggagattact
aaagaggagctactgagaagattgcagcaaattagagaaggacctcctccgccaaattca
gatgaaaacagaggtgagaatgccgaagactcttctaatggagattctataatagactgg
ctaaattcagtgcgacaaactggaaacacaacaaggagtggacaacgtggcaatcagtca
tggagggcagtcagcaggacaaatccaaatagtggagattttcggtttagtttggagatc
aatgtgaatcgcagtaccggtaaccaaaatctgcctcctggtgaacagtcggaaggctct
ggggttgaaaatatggaacttgccaatcaaggtgaggctgaggccgagccggagccagta
acggagaccgtaacggagccagtaacagagacagtaacagagccagtatccgagactgta
gctgagaccgtaacggagccagtaacggagccagtaacagtgcccgtgcctgagccagtg
cccatgcctgagccagtgcccgtacctgagcccgagcctgaacctgaggtggaagctgaa
cctgaaattgtgacaactggaggaactgtggaaactgtcgtagaggagcctattcctcaa
agaggtcaaaggagagccagaagcagaagcccagagctgcgaaggatcaggtccaggtat
gacagaagccgatcacccttgaatccagctgttgaagtaccaattcggagggctcagcat
aattcatcacagactgttgacccttcgcctgttgaaccagagggtagctctagaaccaga
cagcttgtgactgcatatctgagcaactctgcaactgagacagagggcagctctagaact
aggcagcatgtaacatctaggcaacaggcattagttgttgatcctccgagtgcaagcact
gtggtttcaaactctgagacaaactccccacagccccctccagcagagactccagaaaat
gcagaggctacaggaaccggtcagaggccaccgaccatagttttagatcttcaggtcagg
cgggtacgcccaggggaatatcgtcaaagagacagcattgcaaataggacacgctctcgt
tctcaaactcctaataacaccgttacgtatgagagtgagagaggaggatttcgtcgcact
ttctcaaggtctgaacgtgccggtgtccggacatatgtcagtactatcagaattccaatc
cgtagaatacttaacactggcctaagtgagaccacgtctgttgctatacaaacaatgctg
agacagataatgactggctttggggagctaagttacttcatgtatagtgacaatgatgct
gagcctggaacccctgctgctggttctcctccagtagcaactggagtggaaatgcaaaac
aatgcagcggcagcagctgcagcagcagcggtagcggcagcagcagcaactcctcccaga
gcacctgcaccagagccagcagagccgcctcctgtgcctcccatccctcccgttcctccc
gtccctcccatggaagctgacaatggaagtaatgatgtttcaacctctggaaccaggagg
gagatccgtaataacagaggatctgtaacctttgaagaaagtggttctttgccgtttctc
agattggcacaattttttctccttaacgaggatgatgatgatcagccaagaggactcacc
aaagaacaaattgacaacctgtctacccgaaactatggtgaaaatgatgccctgaaaact
tgtagtgtgtgcataacagagtacacagaagggaacaagctacgcaagcttccctgctct
catgagtaccatgtccactgtattgatcgctggctttctgagaactctacatgccctatc
tgtcgccgtgctgttctggtatcggccaacagagaaagtgttgtttaa

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