Rana temporaria (common frog): 120913821
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Entry
120913821 CDS
T07929
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03320
PPAR signaling pathway
rtem04148
Efferocytosis
rtem04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120913821 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120913821 (RXRA)
03320 PPAR signaling pathway
120913821 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120913821 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rtem03310
]
120913821 (RXRA)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
120913821 (RXRA)
Nuclear receptors [BR:
rtem03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
120913821 (RXRA)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
120913821
NCBI-ProteinID:
XP_040180020
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Position
9:106243043..106511968
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AA seq
481 aa
AA seq
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MDTKHFLPLDFSTQVNSAALNSPGIRGSMTAPLLHPSLSSSGLSPSLGSPTQLHSPLSSP
INGMGPPYSVISSPLGPSMSLSNPGLGYGTGNPQLHSPMNSMGSEDIKPPPGINGILKVP
AHASGPMAAFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDTKDCLID
KRQRNRCQYCRYQKCLAMGMKREGMEHHPSPTTRDRPYPADKAVQEERQRGKDRNENDVE
CSSSANEDMPVEKILEAELAVEPKTETYIEANMGLAPNSPSDPVTNICQAADKQLFTLVE
WAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAG
VGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPSEVEALREKVYASLE
AYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQM
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacatttcctgcctctggatttctccacccaggtcaattccgcggccttg
aactctccaggtattcgtggttctatgaccgcacctctgctccatccatccttaagcagc
tctgggctcagcccgtcgctgggatcacccactcaacttcactcgccccttagttcacct
atcaatggaatgggcccgccgtactccgttatcagctcacctctgggcccatcaatgtcc
ctctccaaccctggccttgggtatggcactggcaatcctcagcttcattcccccatgaac
tcgatgggctccgaggacatcaaaccccctccaggaatcaacggcatcctgaaagtgcca
gcacatgcctccggccccatggcagccttcactaaacatatctgcgccatctgtggggac
agatcatcaggtaaacactatggagtctacagctgtgagggctgcaagggcttctttaag
aggacagttcggaaggaccttacctacacatgcagggacaccaaggactgcctgatcgac
aagagacaacgcaaccgctgccagtactgccgctaccagaagtgtctggccatgggcatg
aagcgtgaagggatggagcatcatccatccccgactacaagagatcgcccgtatccggcg
gataaagctgtgcaggaggagcgtcagcgggggaaagacagaaatgagaatgacgtggaa
tgttcaagtagtgctaatgaagatatgccggtagaaaagattctggaggcggaactggct
gtggagccaaagaccgaaacttacatcgaagccaacatgggcctcgcccccaattctcct
agtgaccccgtcaccaacatttgccaagccgcagacaagcagctattcaccttggtagaa
tgggcaaagagaatcccccacttttcagagctgccgctggatgatcaagtaatactgctg
agagcaggttggaatgaactccttatcgcctccttctcacatcggtcaatagctgttaaa
gacgggattctcctggccactggtcttcatgtgcaccggaacagtgcgcacagtgcaggt
gtaggagccatctttgatcgtgttctgacagaactagtgtccaaaatgcgagacatgcag
atggacaagacagagctggggtgcctccgagcaatcgtccttttcaacccagattctaaa
ggtctctcaaacccatcggaggtggaggcactgcgggagaaggtctatgcatctttggaa
gcttactgcaagcataaataccctgaacagccaggaaggtttgcaaagctactgttgcgt
ctacctgccctccgttccatcggcctgaaatgtctggaacatctctttttcttcaagcta
ataggagacacaccaatcgacaccttcttaatggagatgctggaagctcctcatcaaatg
acttaa
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