Rana temporaria (common frog): 120913836
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Entry
120913836 CDS
T07929
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120913836 (SEC16A)
Membrane trafficking [BR:
rtem04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120913836 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
120913836
NCBI-ProteinID:
XP_040180044
LinkDB
All DBs
Position
9:110177592..110287654
Genome browser
AA seq
2384 aa
AA seq
DB search
MQPPPPAGPSGMGGPPRMAMTTNAYWRKRTPTPSAMAAPPVQPVTDPFAFGRMTPQSMAL
GNAPKSNMLTMSSPSPSLYPQPGPPSAAADQSLAGAQAYLPSSTPQPVAGAAMHSSVSPP
LLPSGHFSNNMAPTPTMQLGFAHSAPTSLHNITGGLENASVPSQGRSQSRQSVVTEGGNG
SQVSAPLQSYPPSSSQQTTAPWGSTQVAPPTSSQNFPPAAQHAAYNTPYYSPPYLEVSHL
PPQSSDQTYFSAPHRTAPASFPLTGGSNHIQQQSASQFNNTIPMDYMHNQNIEQNSRFGQ
AYHEPQQNPPLPSSNTIPPGAPLPVPENKPQSESAKILGREGNSGTVSTFFKGDEAENFE
ILSTEQQLNASRQASNISYQPVGHSAILSLSQTQPAVSTSQTMTSSPFHPAVTNAPSLVS
EISSSFQDPHVLWEVDNSDNQHTEAKGGSEQLYDNVENIECVQNLEVLPNEPHNNTFPTG
LNLEGLRYGSLPAPALPKNIPSHTEGGPNMEAFGGMSRSVRSDSVSSNYSNLSHRSLPIS
TRPQELIGTFIQKESGKLENESTNSFFKQIDSSPLSKDSNVQAVGQKTFHGNLSQPPAPS
PPKPTGIFQASVNSSFEPVRSYIGVKPVDIDQSKIVGEVRDANKHIPNTSNSATSAVSPG
NLEQPPDNLETIFTSSANAEVLNVTSGNVFGVPPFDSLLLDKRPSSRAHGSNKKCESPAT
TLWAQGELPNFGGNVLLAPPAPAVYVPPKPQNEVIQPPEDGAIATQNSRLDPAQFVTMPE
EHTSSENLENPPKIGDDEHPPSQASSGYASLLSSPPTDSLQNQPVLIAQPSKNYNLAQPI
NFSLSLPNQIKNLNSVKDPSAADRPAHTGNYIPDQNASLALVQPGPPLKMPNSLNNNFPP
GSDRFSEMFSSLPQNVKPSSSNQFPLNLVTEGQKNGKAESVAVESIKSSVPVSGSYAPVG
NSTGTVTVSGNLVGSHMENVGAVDFTVPRASTNQNANAHALFQNPPPIGAPNYPNQSSNV
PNFQPGPDINKQGFYQQVTKVAQQQPSFETLQPRSGPFHEYMTPVSQAPPGAPPGQVVSG
SKPVTYLPQPAPPVPTGQNPADLRYTGTSEPGTKYESYEQKPYPPHPVSTSTTPANPSQS
VGYPEQARPPTSQTPQQVDPYYYYRGYGTYPSAYPQPYPPMDPRASHLYYQDPYGTYDPA
YRQHSNNGFVNPPAKYPYQEPERPSSRSSHCSDRPSSRQGYSAPANYYADYYQTQYDYGD
QSRWDRYPETYDPGYRDPRSSYWNFMYAAREDPYRKVPYGYTSRYDVYEDRWQYDPRYVG
GFDDEVDARRDLAKDDFDRRSIHSEHSARSVHSEQSTHSRRSSFSSRSQQSQIYKSDQDL
TTNVYSNHPANPAHGDYNYSMYANEYSTQQPLDSSQYVYSSGSEWQPVEQVPSRPLTPEK
FGSPHVCARFGPGGHLIKVLPNLPSDGQPTLVEIHNMEIIMQSCPGQEQMRAFPGPLVKD
ETHKVDVINFAQNKAKECTQNENLMDQESSRLLWDFVVLLCRQNGTVVGTDIAELLLQDH
KTVWLPGKSPNEANLIDFSNEPLEQEEESVAAQLSFLTDTLPISGAVMEKETERFRELLL
YGRKKDALESAMKHGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLLSGRM
PAAATCCGDEKWGDWRPHIAMVLSNITNNLDVPTRTMTTMGDTLASRGLLDAAHFCYIMA
QAGFGVYTKKTTKLVLIGSNHSLPFAKFATNEAIQRTEAYEYAQSLGAQTISLPNIQVYK
FIYACRLAEHGLSAQAFQYCELIAKTILKHPSYYSPVLVSQLLEVSLHLRFFDPQLKEKP
EQELFVEPSWLVRIRHLDMQMKQGTVVYNTGRTTPQQYACSTPSSEQDHISQSDGMPVAH
EGLHNTDNPLLANLLPNMIPPVQGVQLALPGPEHAATYQPPPVSEPFYPVTQQTFVPSPG
FSPPVSGPGFGTFSSDPVPTYTPAAMEPAPTPPQPTEFTPQEQWSQEPTVQRLPQSSPTK
TTFHDPGFDFYGEMAKMAPGQRSRTVSQSSSHMRRTRTTSESSTHSIGSTRRSSIGIQPS
TPPAAIPETETSEPKKEPKANYPSQGGSRSWFPLKIGWLMGKGKNEAHLPDDRNKSIVWD
ENKQRWVNLDEPEGEESKPLPPPPSIMPKRPQSGSSGPGGPGAPPNPSVNMFSIRAGGAR
GRYVDVLNPGGSKPASTLPPPADLFAPLAPMPIPSNLFVPNSVPEEGQPSLGSDAETVQP
PDQPGLDNLTQTQFLSATSGSDLPPSNSDDYPSGELSRSSSLSSLSREVSQHMNQAFSNA
APTSGPPVGTVPFYNPSSFTQQTPAGGSAARPGRLGQRKYPALK
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgcagccacctcctcctgctggtccttcgggaatgggcggacctcctcgaatggcaatg
accactaatgcatactggcgtaaaagaactcctactccatcagccatggcagcccctcca
gtgcagccagtcactgacccctttgcatttggcagaatgactcctcaaagtatggcactg
ggaaatgcaccaaagtcaaatatgctgacaatgtccagtccatcaccctcactgtaccca
cagcctggtcctccctcagctgctgctgaccaatccctggctggagcgcaagcatactta
ccaagttctactccccaacctgttgcaggggcagccatgcacagcagtgtgtctcctccg
ttgttacctagtgggcatttctcaaacaacatggctcccacacctaccatgcaactgggg
tttgcccattcagccccgacatctcttcataacatcacaggaggactggaaaatgcatca
gtgccaagtcagggcagatctcaaagtaggcaaagtgttgttacagaagggggtaatgga
agccaagtttcagcaccattacaatcatatcctccctcatcttctcaacaaaccacagca
ccttggggatctactcaggttgcaccacctacctccagtcagaatttccctccagctgct
cagcatgctgcttacaataccccttattattcccctccttatttagaagtttcccacctg
ccaccccaatccagtgatcagacctacttctcagccccacatagaactgctccagcatct
ttcccacttactggtggctccaatcacatccaacagcaaagtgcttctcagttcaacaac
actatcccaatggattatatgcacaaccaaaatattgaacagaacagccggtttggtcag
gcctaccatgaaccacagcaaaacccaccattacctagttctaacactataccacctggc
gctccattacctgtacctgaaaataagccccagagtgaatctgcaaaaattctaggccgg
gaaggtaattcaggaactgtatcaacattttttaagggggacgaagcagaaaattttgaa
atcctctcaactgaacagcagttaaatgctagtaggcaagcaagtaacatttcctatcaa
cctgttgggcactcagcaatattgtctctttcacaaactcagccagctgtttccacctcc
cagacaatgacatcttcaccatttcatcctgctgttacaaatgctccatcattggtatcg
gagatttccagtagttttcaggatccacatgtactttgggaagtagacaacagtgataac
caacacacagaagccaaaggtgggtctgaacagctctacgataatgtggaaaatatagag
tgcgttcaaaatctggaagtcttaccaaatgaaccccacaataacacttttcctactggt
ttaaatttagaagggttaaggtatggatccttacctgccccagctctccctaagaatatc
cccagccacactgaaggaggtccaaacatggaggcctttggtgggatgtcacgttctgtt
cgatctgatagcgtatcttcaaactacagtaacttaagtcaccgaagtcttcccatctca
acaagacctcaggaactgataggcacctttattcagaaggaaagtggtaaacttgagaat
gaaagtaccaacagtttctttaagcaaattgattcttccccattgagtaaagactctaat
gtacaagctgtgggacagaaaactttccatggtaatttgtctcagcctccagcaccaagc
ccaccaaaacctactggaatatttcaggccagtgtaaacagttcttttgaacctgttcgt
tcatacataggtgtaaagccagttgatatagaccagtcaaagatagttggtgaagttcga
gatgccaacaagcacataccaaacacatccaacagtgccacatcggcagtttccccagga
aatctagagcaacctcctgataatttggaaactatttttactagcagtgctaatgctgaa
gttttgaacgtaaccagtggtaatgtttttggagttccacctttcgatagcctattgctg
gataaacgtccatcgtcaagagctcatgggtcaaataaaaagtgtgaaagccctgcaact
actctgtgggcccaaggagaactgcccaattttggaggcaatgtcctactggctccacca
gctcctgctgtttatgttcctccaaaaccccaaaatgaagtaatacagcctccagaggat
ggggctatagctacacaaaacagcaggcttgacccagcacagtttgtgacaatgccagaa
gagcacacctcctcagaaaatcttgagaaccctccaaaaataggagatgatgaacatcct
ccatcacaggcaagttctggatatgccagtctgttgtcttccccacccacagattccctg
caaaatcagcctgttctaattgctcagccaagcaaaaactataatttggcacagcctatt
aatttttctttgtctttgcccaatcaaatcaagaaccttaattctgtaaaagatccatca
gcggctgacaggccagctcacactggtaattatattcctgatcagaatgcttctcttgct
ttggttcagcctggacctccgcttaaaatgcctaattctctcaataataatttcccccct
ggcagtgatcgattttctgaaatgttttccagtttgcctcaaaatgttaagccatcgtca
tccaatcaatttccacttaatttggtcacagaggggcagaaaaatggtaaggcagaaagt
gtagcagtcgagtcaataaaatcttcagttcctgtatcagggtcttatgcgccagtggga
aattctactgggacagttactgtctcagggaatttggttggcagccacatggaaaatgta
ggtgctgttgattttactgtgcctcgtgcatctaccaatcaaaatgcaaatgctcacgct
ctattccagaatccacctcctatcggtgcccctaactatccaaatcagtcaagcaatgtc
cctaatttccagcctgggccagatattaacaaacaaggtttttatcagcaggttactaaa
gtggctcaacagcagccttcctttgagactttgcagcctagatcggggccttttcatgag
tacatgacgcctgtttctcaggctccaccaggagctcctccagggcaggtagtttctggg
tctaaacctgtgacttatctaccacaaccggcacctccagtgccaactggccagaatcct
gcagatctacggtacaccggcacttcagagccaggaactaaatatgagtcttatgagcag
aaaccttaccctcctcatcctgtatcaacctcaaccacaccagcaaaccccagccagtct
gttgggtatccagaacaggcaagaccacctacttctcaaacgccacagcaagttgatcct
tactactactacagagggtacggtacatacccatcggcttatccacagccatatccaccc
atggatcctcgagcctctcatctctactaccaggacccctatggaacttatgacccagcc
tacagacaacatagtaataatggatttgtgaacccccctgcaaagtacccttaccaagaa
ccagagcgtcctagctcaaggtctagtcactgctcagaccgaccatcgtcaagacaagga
tacagtgcaccagccaattactatgcagactactatcaaactcagtatgattatggggac
caatctagatgggatcgctatcctgaaacctatgatcctggatacagagaccctcggagt
agttactggaattttatgtatgctgctcgggaggacccttatagaaaggttccatatggt
tacaccagcaggtatgacgtgtatgaagaccgttggcagtatgacccacgctatgttggt
ggctttgatgacgaggttgatgcacgtagagatcttgccaaagacgattttgatcggcgc
agcatacacagtgagcattcagcccgcagtgtgcacagcgagcaaagcacgcacagtcgt
cgcagtagcttcagctctcgttcacaacagagtcagatctacaaaagcgatcaggatctg
acgacaaatgtgtacagcaaccaccctgctaaccctgctcatggcgactataactacagc
atgtatgcaaatgaatatagtacacagcaaccgttggacagctctcagtatgtctactca
agtggctcagagtggcagccagtggaacaagttccttccaggccccttaccccagaaaag
tttggcagccctcatgtttgtgccaggtttggccctggaggtcacctgatcaaagtgctt
cccaacctcccttcagacggacagcccacgcttgtagaaatccacaacatggagattatc
atgcagagctgtcctggacaagaacagatgagagcgtttccgggacctctggtcaaggat
gaaacccacaaagttgatgtcattaactttgcacaaaacaaagccaaagagtgcacacag
aatgaaaacctgatggaccaggaatcgtcccgtctgctctgggattttgttgttcttctg
tgcaggcaaaatgggactgttgtagggactgatatagccgagttgctgctgcaagatcac
aaaactgtgtggcttcccgggaaatcaccaaacgaagcaaatctgatcgatttcagcaat
gagccgctggaacaggaagaggagtctgttgccgcccagctctcctttcttacagatacc
ttgcccatcagtggagcagtcatggaaaaagagacggaacgtttcagggagttgctactg
tacgggcgaaaaaaggatgctctggagtctgctatgaaacatggactgtggggccatgca
ctgctactggctagtaaaatggacagccgaacgcatgccagagttatgaccaggtttgcc
aacagtctcccaattaatgatcctctgcagacagtctatcaactgttgtctggaaggatg
cccgctgcagccacgtgttgtggggatgagaaatggggtgattggagacctcatattgct
atggtattgtcaaatataaccaataaccttgatgttccaacaagaacaatgactactatg
ggagacacattggcatccagagggctcctagatgctgctcacttctgctacattatggct
caagctggttttggagtttacacaaagaaaacaaccaagcttgtccttattggctccaac
catagcttgccttttgccaagtttgcaaccaatgaggcgattcagaggactgaggcgtac
gaatatgcccaatccctgggtgctcagaccatctccctgcccaatatccaggtttacaag
tttatctacgcctgccgactggctgagcacggcctctcggctcaggccttccaatactgt
gaactcattgcaaagaccattcttaaacatccatcttactactcccctgtacttgtcagc
cagctgcttgaggtgtccttacatttgaggttttttgatcctcagttgaaagagaagcca
gagcaggagttgtttgtagagccatcatggttggttcgaatccgtcacctggatatgcag
atgaagcaaggaaccgtggtatacaatactggaagaacaaccccccaacaatatgcctgc
agcacgccaagctcagaacaggatcacatcagccaatcagatggcatgccagtagcccat
gaaggcctccataacacagataatcccttactggccaacctcctccccaacatgattcca
cctgtccagggtgtacagttggctcttccaggtcctgaacacgctgctacatatcagccc
cctccagttagcgagcctttctatcctgtcacacagcagacttttgtcccctcacctggg
ttctcccctccagtgtctggcccaggatttgggactttcagcagtgaccctgtacctact
tacactcctgctgctatggagcctgctcccacccctccacaacccaccgaatttacacct
caagagcagtggagccaggagccaacagtgcaaagactaccgcagagctctcccacgaaa
accacctttcatgaccccggatttgacttctatggggaaatggctaaaatggccccagga
cagagatctaggactgtgtcccagtcgtcatctcacatgagacggactcggaccacctct
gagtcctctacccactctattggatcaaccagaagaagttctataggtattcagccttca
acccctcctgcagccattcctgaaacggagacgtccgagcccaagaaagaacctaaggcc
aattacccatcacaagggggcagtagaagttggtttcctttgaaaattggctggctgatg
ggaaaaggaaagaacgaagcccacttacctgatgacaggaataagtctatcgtttgggat
gagaacaaacagcgctgggtgaacctagatgagcctgagggagaggagagcaagcccctg
cctccacctccgtcaattatgccgaaaagacctcagtctggctcctctggaccaggcgga
cctggagctcccccaaacccttcagtcaatatgttctctatcagagcaggaggtgccaga
ggccgctatgtggatgtgttaaacccaggtggcagcaaaccagcaagtactttgccacca
ccagctgatctttttgctccgcttgcaccaatgcccatcccatcaaacctctttgttcct
aactcagttccagaagagggtcagcccagccttggctcagatgcagaaacggtacaacct
cctgaccagccaggtcttgataatctcacccagacccagtttttaagtgcaacctctgga
tctgatctgccaccttcaaactcagacgactatccttctggagagctttctcgatctagt
tctctgagttccttatctcgagaagtaagccagcatatgaatcaggccttcagtaacgct
gcccctacatctggtcctcctgttgggaccgttcccttctataacccttcaagttttaca
caacagactcctgcaggaggaagtgcagcacggcctgggagacttggtcagcgaaaatac
ccagcactgaaatag
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integrated database retrieval system
