Rana temporaria (common frog): 120913852
Help
Entry
120913852 CDS
T07929
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120913852 (SNAPC4)
03021 Transcription machinery [BR:
rtem03021
]
120913852 (SNAPC4)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
120913852 (SNAPC4)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
120913852 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
EAD9
Motif
Other DBs
NCBI-GeneID:
120913852
NCBI-ProteinID:
XP_040180081
LinkDB
All DBs
Position
9:complement(112220364..112329578)
Genome browser
AA seq
1631 aa
AA seq
DB search
MLLAEPDTALLFAYDYPECHSAAQAVTHQCMQAGTMAAFDLKAEKDKIQREIEALERSLG
PNAAALSVDVSDSDDSDDDLEEQFDGDCQTDDVAWEDGGSSAEMCLQMNLVYQAVIEEKL
QELEVLIAQNKEQQEELMWELAGRKTQRAGTNKLYPLNLALGHFMKPYFKDKVSGLGPPA
NQEMKERSLHIVKAFNELVHKNWKPTDDLELKKAIFSDTLQKMLQPKMLKIEYLQQKYDN
TKNDIEKKILTKQIQEAESEMDDINQLKEDVLLGQRTDSHDWDKISNINFEGVHTPERLC
NIWHNYEHPHINKEVWTEAEIEKLKEIAMAHNFVDWQVIAQELGTQRTAFQCLQTFQRNN
KAFKRSEFTKEEDEMLKHFVQRMRVGEHIPYKKISYFMEGRDGLQLLYRWTKCLDPSLRK
GPWTKEEDEMLLKAVAKYGERWYKIRFDVPGRSDVQCRERYVKGLRKDIKKGRWDTEEKD
KLVELTAKYGVGHWAEVCKGVPNRTSSQCLSKWKHLIGYFKGRVRKKKPRLKRLRKKNPP
KSPKPQKPPKANTIKKEMASDEEISIDSSSSSSESIVISSSESEDEAMELMDQFGEGEIS
SLLQSVPDLDLWIPRKRSPGLQGKNLHVYSAASNNKKPPRTKKKRKESTFKFNTILKGIA
YPPSTDTVTETVEDFLKEEEKKEHEILQILEEDLIKILMRNTQECERKQIQRIMPPSDSD
GNQHKDSSTSLSQLAVTRLYKASVDRKLLCAVTRWVGNVFLPISTNRGRGFRGRTWADEV
NKKLSCVTMTSTPIFTLLIQYFQIDAEGCLQMIQQRKREESEFFKRVKNSTKKTARKMSG
SAPLSPKSILVQSFNDQKPNPVVSQITTEITSPPLQKCRRSKSTRVRSDVPAPKMKTVSE
LLREKRMQKKIATKTVQSTSVLSGNILVLPQFQHSVNPTVQPQTMVLPVSPTTSQNNSWP
IRPFSPVPTCQVVTNNSSFNRMSLVSGGPISRLVAGPTGNVPVPQNANVQRNVQNRLSGM
PPSPQPLPNQIIRAVSPAPNFSALPMTILITPQGLISIPTQALPTLTQQSGNQSPRIVST
TLNTAATGPFVTESSNSSFTNAPSKSLYVPAQPLPATTSSKTEQSIVTSSSIVNFPQASG
NQLTMLVPCETSRKPFQILPAVASRLSQDGTVVASSVGSLPQMVDSHLPTIAPIKVSKMS
PVAVPTITSSLSHEDVAATSNSSPLVAEACLSKTAPSDFSKMLSQTLPPTTSSLRDKGTK
NALVESQPQLTDSCLPTLTPSSASNTGLSSSLTQVDATVFSQDVSEKKEACSHLPILALS
KPSAMLSQMVPVTSSSKQEGISVASLVTSQTQPESTLPKVALSPGLPDKASQLKLTPQKY
PIVKLAKLLPTNLSREEAANVTSDPQRNPVSNISKRITNSQKILDFKLISLEEETSVKEW
LQGKQGVEVPKQTMTIPYLPPSICTLKTFSRLLLEKKTLEENAFKLLPFSDITEVGSPQM
QATVCDMVEEGLKDNLAYQLIKQRFLSAFTIPGFLAVLPPTHVSSKQEDSDEDIEDLMNS
ETTMVEATHKGNHAAAEGDSSGNISEKDAPMLAEQVGLKETALICSTENSSNIDNTERIV
TRRSVYCRPVT
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggctgagcctgacactgcactgttatttgcatatgattacccagaatgccac
agtgctgctcaagcagtcacacaccagtgtatgcaagcaggcaccatggctgcttttgat
ctgaaggcagaaaaggataaaatccagagagagattgaagcacttgagagaagtttgggt
ccaaatgctgcagcacttagtgtggatgtgtctgactctgacgattctgatgatgatctt
gaagaacaatttgatggcgattgtcagacagatgatgtcgcctgggaagatggtgggagc
tcggcagagatgtgcctgcagatgaaccttgtgtaccaagccgtaatagaggagaaactg
caagaactggaagtgctgatcgcacagaataaggagcagcaggaggagctaatgtgggaa
ctcgctggtcgaaagactcaaagggctggaaccaataaactctacccattaaatctggct
ttgggccatttcatgaaaccatactttaaggataaagtcagtggattggggcctccagct
aatcaggaaatgaaagaaagaagtctccatattgtaaaagcatttaatgaactggttcac
aagaattggaagcccacagatgatttggaactgaaaaaagctattttcagcgacacatta
cagaagatgctgcagcccaaaatgcttaagatagaatatctccagcagaagtacgataat
accaaaaacgacattgagaagaagattttaacaaagcagatccaagaggcagagagtgaa
atggacgatatcaaccaacttaaggaggatgtgttgctgggacaaagaaccgattcccac
gattgggacaaaatttccaacatcaattttgaaggagttcacaccccggagcgactgtgc
aatatttggcacaactatgagcacccgcacatcaacaaagaggtctggacagaagcagag
atcgaaaaattgaaggagatagcaatggctcataactttgttgactggcaagtgatcgca
caggaattggggacccaacggacagcgttccagtgtctccagacattccagcgcaataac
aaagcctttaaacggagtgagttcaccaaggaggaagatgagatgttgaaacattttgtc
cagcgaatgagggttggggaacacatcccttataaaaaaatctcttattttatggagggt
cgagacggtttgcagctcctgtatcgatggacaaagtgcctggatcccagtttgaggaaa
ggcccatggaccaaagaggaagatgaaatgttgttaaaagcagtagctaaatatggtgag
agatggtacaaaattcgatttgatgttccgggaaggagcgatgtccagtgccgggagagg
tacgtcaaagggcttcgtaaggatattaagaagggtagatgggacacggaggagaaggat
aaacttgttgaacttacagccaagtatggtgttggtcactgggcagaagtgtgcaagggg
gtgccaaaccggacttcatcacagtgtctcagcaaatggaagcatttaataggctacttt
aagggaagggtgagaaaaaaaaagccgagactaaaacggctgagaaaaaaaaacccacca
aaatcaccaaagccacaaaagcccccaaaggcaaatacgatcaaaaaagagatggcaagt
gatgaggagattagcattgatagcagtagcagtagcagtgaaagcattgtcatcagcagc
agcgagagtgaggatgaagccatggagctgatggaccaattcggagaaggagagatctcc
agtttgctccagtctgttccagatttggatttgtggatccccaggaaaaggagccctggt
ttgcagggcaagaacctccatgtctactctgctgcctctaataacaaaaagccaccaaga
actaagaaaaagaggaaagagagcacttttaaattcaacaccattttgaagggtattgcc
tatcctccatccaccgacacagttactgagaccgttgaggacttcctgaaagaggaagaa
aagaaagaacatgaaattctgcagattctggaagaagatcttatcaaaattcttatgagg
aacacacaagaatgtgaaaggaaacagatccaaagaataatgcctccttcagattcagat
ggtaatcagcacaaggattccagcacgtctttgtcgcagttggctgtgacacgtctgtac
aaagcatcagtagatcggaagctgctctgtgcagtgacgcgttgggtaggaaatgtgttt
cttccgatttcaacaaaccgtggaaggggttttagaggaagaacttgggccgatgaggtc
aataaaaaactgagttgtgtgactatgaccagcactccgattttcaccctcctcattcag
tattttcagatagatgcagaaggctgtctgcagatgatccagcagcggaaacgtgaagaa
tctgagtttttcaaaagggtcaaaaactctacaaaaaaaacagccagaaaaatgtcaggc
tcggctccgttgtcgccaaagagcattctggtacaatcttttaacgaccagaagcccaat
cctgtggtttcccaaattacaacagaaattacatcaccacccctacagaaatgtcgccgt
tccaaatcaaccagagtgagatctgatgtgccagcccctaagatgaaaacagtctctgaa
ttgctaagagaaaaaagaatgcaaaaaaaaattgccaccaaaactgttcaaagcacctca
gtattgtctggaaatatcctggttctaccacaattccaacattctgtgaaccctacagta
caaccccagactatggtgctgcctgtgtctccaactacttcacagaataactcctggccc
attaggcccttttctcctgtgccaacatgccaggttgtaacaaacaattcttctttcaat
cggatgtcactagtcagtggtggacccattagcagactagtggcaggccctacaggaaat
gttccagttccccaaaatgcgaatgttcaaagaaatgttcagaataggctatcgggtatg
ccaccatcacctcagccattgcctaatcaaataatcagagcagtgtcccccgcaccaaac
ttcagtgcacttcccatgactattctgattactcctcagggtttgatttcaatcccaacc
caagctctaccaactttaacccagcaatctggaaaccagagcccccgaattgtaagcaca
acattgaatactgctgccactgggccttttgtaacagaatcgtccaacagtagcttcaca
aatgcaccatcaaaaagtttgtatgttccagcccaacctttgcctgccaccactagctcc
aaaaccgagcaaagcattgtaacatcttcttccattgttaacttccctcaagcatctggc
aatcaattgacaatgcttgtcccatgtgaaacatctaggaagccattccaaatcttgccc
gctgttgccagtcgcttaagtcaagacggcactgtggtggcctcttcagttggaagtcta
ccacagatggttgattctcatttgccaactattgccccaatcaaagtttccaagatgtca
cctgttgccgtacctactattacaagttctttaagccatgaagatgttgctgccacctct
aatagcagtccattagtggctgaagcatgtttgtctaaaactgccccatctgatttttca
aagatgctatcccaaactttgcctcccactacaagttccttaagagacaaaggcactaag
aatgccttggttgaaagccaaccacagctgactgattcttgtttgccaactcttacgcca
tccagtgcgtctaacacaggtttatccagctctttaacacaggtagacgcaacagtattt
tcacaggatgtgagcgaaaaaaaggaggcctgttcacatttgccaatactggccctatcc
aagccttctgcaatgctatctcagatggtgcctgttacaagctcctcaaaacaggaaggc
atttctgtggcctctttagttacaagccaaacacagccggaaagcactttgccaaaagtt
gccctttctccagggcttcctgacaaggcaagtcagcttaaactcacgccacaaaaatat
cctattgttaaactagccaaacttttgccaacaaatctttccagagaggaagcagcaaat
gtgacaagtgatccacagcgcaatcctgtatcaaatatctctaagcggatcacaaactct
caaaagattttagattttaaactaatttctttagaagaagagacaagcgtgaaggaatgg
cttcagggaaagcaaggggtggaagtaccaaagcaaacaatgacaattccttatttgcct
ccttctatctgcactctcaaaactttttcaagacttctgttggagaaaaaaacattggaa
gagaacgcttttaaattgttgcccttttcagatatcacagaggttggctcacctcaaatg
caagcgactgtctgtgatatggtggaagaggggcttaaggacaatttggcctaccagctt
attaaacagcgtttcctctctgcgtttaccattcctgggttcctagctgttcttccacca
actcatgttagtagtaagcaagaggacagtgatgaggacattgaggatttaatgaacagt
gaaacgacaatggttgaggctacacataaggggaatcatgctgctgcagaaggagattca
tcgggcaatatatctgaaaaggacgcaccaatgcttgcagaacaggtaggattaaaggag
acagcgttgatttgcagtactgaaaactcaagcaacattgacaacactgaaaggatagta
accagaagaagtgtttactgccgaccggtaacctga
DBGET
integrated database retrieval system
