Rana temporaria (common frog): 120913885
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Entry
120913885 CDS
T07929
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04010
MAPK signaling pathway
rtem04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120913885 (CACNA1B)
04020 Calcium signaling pathway
120913885 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120913885 (CACNA1B)
Ion channels [BR:
rtem04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120913885 (CACNA1B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
120913885
NCBI-ProteinID:
XP_040180146
LinkDB
All DBs
Position
9:115271674..115688984
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AA seq
2251 aa
AA seq
DB search
MILATIIANCIVLALEQHLPEHDKTDMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKG
SYLRNGWNVMDFVVVLTGILATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MVPLLQIGLLLFFAIVMFAIIGLEFYMGKFHKTCFSRDTGEPTGDFPCGDEPPARTCDNE
TSVCRLYWKGPNFGITNFDNILFAVLTVFQCITMEGWTDILYNTNDAVGAMWNWLYFIPL
IIVGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVM
LAEEDKNAEEKSPLDVLKRATIKKSKNDLIHAEEGEDHFNDICSVGMLLCRKKEDVLQSK
PLGSPFARSSLKSGKNESSSYLRRKEKMFRFFIRRMVKAQSFYWFVLCVVALNTLCVAIV
HYNQPAWLTKALYFAEFVFLGLFLTEMSLKMYGLGPRHYFHSSFNCFDFGVIVGSIFEVI
WAAVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIVSLLFLLFLFIVV
FALLGMQLFGGQFYFEEETRNTNFDTFPTAILTVFQILTGEDWNNVMYFGIESQGGVSKG
MYSCIYFIILTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVA
EVSPMSAANLSITAFVKQTRGAISRSPSICNVNLPGQQNSTKCRSVWEQRTTQIRMHNFQ
ASCEALYSELEPEDRLRYATTLRLRPDMKSHMDRPLLVDPQDSTETKDGSPEELAPNEIE
PGPVEATEPAPRKHRHRERGTGETNGGCRENGNHNGDSGSNDREERHRQHRSRSKEGEGG
KEGRGERNRSQERGKRHHRRASPEEGTEREHRRHRTHRHSAERQGKDGNGQPGSGSKGER
KSRHRGGGSRSGTRDGDGTTRGENGEEVPRSRHRNRHKALSTYDTEEKKENKDGESAEKE
HRNHRPRDHRNEAEVPVGGLQQLPEQSEDADNQKNVNRMSQPHTDRSSTVNIPVTITAPP
GDTAVIPINNVEFDVKSEEKKEMEAEDLTKNGPKQILPYSSMFIFSSTNPVRRLCHYIVN
LRYFEMVILVVITLSSIALAAEDPVQADAPHNDVLKYMDYIFTGVFTFEMVIKMIDLGLL
LHSGSYFRDLWNILDFIVVSGALVAFAFSSFVGGNKGKDLNTIKSLRVLRVLRPLKTIKR
LPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKDLEKDCRG
EYLNYENDDVRAQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPNVLKHSVDATYEEQGP
TPGFRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFVI
SAKPLTRYMPQNRQSFQYKMWRFVVSPPFEYFIMVMIALNTIVLMMKFYGASSTYEEMLR
GLNIIFTSMFSLECILKIIAFGVLNYLRDAWNVFDFVTVLGSITDILVTEIANTENFINL
SFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNI
GLSDDSAINSHNNFRTFFQALMLLFRSATGEGWHEIMLSCLSNRPCDQRSGNNTAECGSD
FAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACY
RIHYKDMYNLLRVIAPPLGLGKRCPSRVAYKRLVKMNMPISDTDLTVHFTSTLMALIRTA
LDIKLAAGGIKQHECDTDLRKEICSVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFD
FYKQNKNNRDQSHQPPGVLSQTGTVSLFQPLKATLEQNIPSPFGSSKIFLRQKSSVSLNN
GGVVPNQEGGIRESSSWGTQPAPDPFSTPRSTAFQRGHSEEIHTQEQVKQSVEMKEIGQS
LSNGGEHSIGLEIQGRAVSMPRLAAEAHPITDTSPMKRSVSTLTPPQRPQLYEYSLERVQ
HDRSHQHHHRCHRRKEKKQKSMDRSPQNDDPEAPPRERRQERGRSQERKQQPPSSSEKQR
FYSCDRYGSRDSGHPRHSDHSRATSPTSGQDPASHRQGSGSASGSPRLTSSGASTPCRGV
RRQLPQTPLTPRPSVTYRTAHSSPVHFGGPIYSPGRLSRGLSEHNTLLYSDSPSHSACTV
TRIGSDPYLGPRQDADSYCPVPEDTLTFEEALASNSGRSSRTSYVSSLTSHSHQLCRVPN
GYHYTLGLSSGSGQAPRVRSYYHEADEDDWC
NT seq
6756 nt
NT seq
+upstream
nt +downstream
nt
atgattttagccaccattattgccaactgcattgtgttggctctggagcagcacttgccg
gaacacgacaagaccgacatgtcagagagactggatgatactgaaccctactttattggc
atcttctgttttgaagctggcatcaagatcattgccctgggctttgtgtttcataaaggc
tcgtacctacggaatgggtggaatgtcatggattttgtggttgttcttaccgggattctg
gcaacagccggcacagactttgacctgcgaacgttgagagcggtgagagtgctgagaccc
ctgaaactcgtctctgggatccccagcctccaggtggtgttaaagtcgatcatgaaagcg
atggtccctctgctgcaaattggattgctgctattctttgctattgtcatgtttgccatc
atcggactggagttctacatggggaagtttcacaagacatgtttctctcgtgatacaggt
gagcccactggtgatttcccctgtggggatgagcccccggcccggacgtgtgataacgag
acttcagtgtgtcgcttatattggaaagggccaaattttggcattaccaactttgacaat
atcttgtttgcggtcttgacggtgttccagtgcattaccatggaaggctggactgacatt
ctgtacaataccaacgatgccgtcggcgcaatgtggaattggctgtacttcatccctctc
atcattgttggctccttcttcatgctgaacctggtcctgggtgtcctttccggggagttt
gcaaaagaacgtgagagggtggagaaccggcgggcattcctcaaactcaggcgccagcag
caaatagaacgtgagcttaatggctatcttgagtggatcttcaaggcagaggaagtcatg
cttgcagaagaagataaaaatgctgaggagaaatcccccttagatgtgctgaaacgagct
accattaagaaaagtaaaaacgatctcatccacgcagaggagggcgaggatcactttaac
gacatctgctctgtagggatgctcttatgtagaaagaaggaagatgttctacaaagtaaa
ccattaggatccccctttgcccggtcaagcttgaaaagtggaaaaaacgagagctcatcc
tacctccgccgcaaggaaaagatgttccggttcttcattcgccgcatggttaaggcacaa
agcttttactggtttgtgctgtgcgtggttgcattgaacacactttgcgtcgccattgta
cactacaaccagccagcatggctcaccaaagccctgtattttgcagagtttgttttccta
ggcctctttctaacagaaatgtccctaaagatgtatggcctgggtcctcgacactacttt
cactcatcttttaactgtttcgattttggggtgatagtgggaagtattttcgaggtgatt
tgggcagcagtaaaaccagggacttcttttgggatcagtgtgcttcgagcactgcggctt
ctccgtatcttcaaagtcacaaagtactggaattccttgagaaacttggtggtgtccttg
cttaactccatgaagtccattgtcagtcttttgttccttcttttcctcttcatcgtggtc
ttcgcacttttggggatgcagctttttgggggacaattctactttgaagaggaaacaaga
aacacaaattttgacaccttccccactgccatcttgaccgtttttcagatcctgacaggg
gaggactggaacaatgtcatgtactttggaatcgaatcacaagggggtgtcagcaaagga
atgtactcctgtatttacttcatcatactgaccctgtttggaaactacaccctcctgaat
gtatttctagccattgctgttgacaatctggccaacgcacaggaacttacaaaggatgag
gaggagatggaggaggctaccaatcagaagctggcactccagaaagccaaagaagtggca
gaagtcagccccatgtcagccgccaacctttcaatcacagcttttgtaaagcaaactcga
ggtgcgatttctcgcagcccatctatctgcaacgtaaatttacctggacagcaaaactca
actaaatgtcggtctgtatgggagcagcgcacaacccaaatccgtatgcacaacttccag
gctagctgtgaggcactctacagtgagctggagcctgaagaccgactgcgctatgctact
actttgcgactgcggccggatatgaagagtcacatggatcgaccgttgctggtggacccg
caagattccacagagaccaaagatggcagcccagaggagttagcacccaatgagatagag
ccggggcctgtggaggctacggagccagcaccacggaaacaccgacaccgtgagagaggc
acaggtgaaaccaatggtggctgtagagagaatggtaatcataatggagactcgggtagt
aatgatagagaggagcgccatcggcagcatagaagtcgcagtaaagaaggggaaggtggg
aaggaaggaaggggagagcggaatcgaagccaagagaggggaaagcggcaccaccgcagg
gcctcccccgaagagggtacggaaagggagcaccgccggcaccgtacacaccgccactct
gcagaaagacaaggcaaagatggtaatggacaaccaggttctggcagcaaaggcgaaagg
aagtctcggcaccgaggaggagggtctagatcaggcaccagagatggagatggcacgact
cgtggtgaaaatggggaggaggttcctaggtcacgtcatcgcaacaggcacaaagcactt
tctacatatgacacagaggagaaaaaagaaaataaagatggagaatctgctgagaaggaa
catcgcaatcacagacccagggaccaccgtaacgaggctgaggtccctgtcgggggtcta
cagcagctgccggagcaatcagaagatgccgataaccaaaaaaatgtgaaccgaatgtct
cagccacacacggaccgctccagcacagttaatatacccgtcaccatcacagcaccgccc
ggcgacaccgcagtcataccaatcaataacgtggaattcgacgtcaagtctgaggagaag
aaggagatggaagcagaggacttaacgaaaaatgggccgaagcagattctgccatacagc
tccatgttcatcttcagctccaccaacccagtccgccgtctgtgtcactacattgtcaac
ctacgctattttgagatggtcatcctggtagtcattacactgagcagcattgcactggct
gcggaagaccccgtacaggccgatgcccctcacaatgatgtgctgaaatatatggattac
attttcacaggggtcttcacttttgagatggtgataaagatgattgatttgggtcttctc
ctccattctggttcatatttccgggacctctggaatattttagattttattgtggtcagt
ggagccttggtggctttcgccttctcgagttttgttggagggaacaaagggaaagatcta
aacaccatcaaatccctgcgggtcctcagggttctgcggcctttgaaaactattaagcgg
ctgcccaagctcaaggcggtgttcgactgtgtagtgaattcactgaagaatgtactcaac
atcctcatcgtttatatgctcttcatgttcatctttgccgttattgctgttcagctcttc
aagggcaagttcttttactgtacagatgagtcaaaagacctggagaaagattgccggggg
gaatatcttaattatgaaaatgatgatgtgagggcacagcccagggaatggaagaaatat
gaattccactacgacaatgtcctttgggctctcctgactctctttacagtttccactggg
gaagggtggcccaacgtcctaaaacactcggtggatgcaacctacgaggagcagggcccc
actcccggctttcgcatggaaatgtccatcttctatgtggtctattttgtggtgtttcct
ttcttctttgtcaacatatttgtggctctaattatcatcactttccaggagcagggagac
aaggtcatgtcagagtgcagtcttgagaagaatgagagggcctgcatagactttgtcatc
agtgctaagcccctaacgcgatacatgcctcagaaccggcaatcattccaatataagatg
tggcggtttgtagtgtctcctccatttgagtatttcatcatggtgatgattgcgctcaac
accatcgtgttgatgatgaagttctatggagcatcaagtacctatgaagaaatgttgcgg
ggcctcaatattatcttcacgtcaatgttctcactggaatgtatcctgaaaatcattgcc
tttggtgttctgaattacttgcgggatgcttggaatgtgtttgactttgtcacggttttg
ggaagtataactgatatattagtaacggagatagcgaacacggaaaatttcatcaacctg
agtttcttaagattatttcgagctgctcgactgattaagttgctacgtcaaggttacacc
atccgcatccttctgtggactttcgtacaatcgtttaaggccctgccctatgtctgcctc
cttattgcaatgctgttcttcatctatgccattattggtatgcaggtatttggcaacatt
ggtttgtctgatgatagcgccatcaacagtcataataacttccgcaccttctttcaagca
ctgatgctcctgttcaggagtgccactggtgagggctggcacgagatcatgctgtcctgt
ctaagcaacagaccctgtgaccaacgctccggtaacaacacagcggaatgcggaagtgac
tttgcatatttctactttgtctcctttatcttcctgtgctctttcctgatgctcaatctc
tttgtggccgtcatcatggataattttgagtatttgactcgagactcctccattctgggt
ccacatcatctcgatgagttcatccgtgtttgggcagagtatgatccagctgcttgttat
cgcattcactataaggatatgtacaatttattacgtgtaattgcccctccactggggctg
gggaagcgctgcccgtcgcgggtagcctacaagcgtttggtaaagatgaacatgccaatc
tctgatacagaccttaccgtccacttcacgtccacactgatggcgttaattcgcacagca
ctggacattaaattggccgcaggtggaataaagcagcatgaatgcgacacagatttacgg
aaagagatctgctcagtgtggcccaacctgtctcagaaaacattagatttgcttgtcccc
cctcataaaccggatgaaatgactgttgggaaagtttatgcagctctcatgatctttgac
ttctacaagcagaacaaaaacaaccgggaccaatctcatcagccacctggagtcttatct
cagacgggaacagtgtcccttttccagccactaaaagccactctggaacagaacattcct
agtccgtttggcagcagcaaaattttcctacgacaaaagagctcggtatccctgaacaac
ggcggtgtggtacccaaccaagagggtggaatacgggaatcaagctcatgggggacgcaa
ccggccccagaccctttctccactccacggagcacagcattccaaaggggccactcagag
gagattcacacccaggagcaggtcaagcagtctgtagaaatgaaagaaattgggcagagt
ttatccaatggtggagagcactcgatcggactggagatacaagggcgagcagtgtccatg
ccgcgcctggctgcagaagctcatcctataactgatacaagcccaatgaaacgctctgtg
tcaacgctgactcccccgcagcggccccagctgtatgaatattccctagagagggtgcag
catgaccgcagccatcagcaccatcaccgatgtcaccggcgcaaagagaaaaaacaaaag
tccatggacaggtctccgcagaatgatgacccagaagctccaccacgggagaggcgacag
gagagagggaggtcacaggaacgcaagcagcaaccaccgtcctcatcggagaagcagcgc
ttttactcatgtgaccgatatggcagcagagattctgggcatccccggcactctgaccac
agccgggccacctcgcccacttctggacaggatcctgcttctcacagacagggcagtggt
tcggccagcgggagtccacgtctgaccagctccggtgctagtaccccatgccgcggagtc
cggaggcagctgccacagacgccgctcactcctcggcccagcgtcacatatcggacagct
cactcttcccctgtgcacttcgggggccccatttactctcccggacgtctgagccggggt
ctatcagagcacaatactttgctgtacagtgattccccaagccactccgcctgcacagtt
acgcgcattggttctgacccgtaccttggaccacgccaggatgccgacagctactgccct
gtgcctgaggacaccttaacctttgaggaggccttggccagcaactctggacgttcctct
cggacttcctatgtgtcctcactcacttcccattcccaccagctttgcagggtccccaac
ggctaccactacaccttagggctcagttcagggtccggccaagctcctagagttcgaagc
tattaccatgaagcagatgaggatgactggtgctag
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integrated database retrieval system
