Rana temporaria (common frog): 120913959
Help
Entry
120913959 CDS
T07929
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120913959 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtem03041
]
120913959 (PRPF4)
Spliceosome [BR:
rtem03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120913959 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_TEP1_C
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_IFT140_1st
WD40_RFWD3
WD40_like
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
120913959
NCBI-ProteinID:
XP_040180258
LinkDB
All DBs
Position
9:complement(120855959..120898852)
Genome browser
AA seq
506 aa
AA seq
DB search
MSDDEGVPAVKKSRIFYGSLAEKERERLHKGESSVGRTSVRAGIDAGNINVGFGESFDID
EHISERQAEVLAEFERRKRARQINVSTDDSEVKAGLRALGEPITLFGEGPAERRERLRNV
LSIVGTDALKKTKKEDEKSKASSEEYQKTWYHEGPTTLKVARLWIAQYSLPRAMERLEAA
REYRNIPESTRTSQKQELHKSLGSLNNFCSQIGDDRPLSFCHFSPNSKLLATACWSGLCK
LWSVPDCTPVRTLRGHNTNVGAIVFHPKSTISLDEKDVNLASCAADGSVKLWNLESDEPV
ADIEGHAVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSKGVYDLSFHVD
GSLAGTGGLDSFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDL
RQRRCIYTIPAHQNLISGVKFQPTNGQYLLTASYDNTAKVWTHPLWSPLKTLAGHEGKVM
GVDISHDGELIATCSYDRTFKLWTAE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgacgaaggtgtcccagcggtgaagaagtcccgtatcttctatggcagtttg
gcagaaaaggagagagagcgtcttcataagggagaatcgtcagtaggaaggacgtcagta
agagctgggatcgatgctgggaacattaacgtcgggtttggagagtcatttgacatagat
gagcacatcagtgagaggcaggcggaggttctggctgagtttgagaggaggaagcgggcc
agacagattaatgtgtccactgatgactctgaggtgaaggccggtctgagagcacttggg
gaaccaatcaccctctttggagaaggcccagccgagaggagagaaaggttgcggaacgtt
ctttctattgttggcacagacgctttaaaaaagactaagaaagaagacgagaagtccaag
gcatcaagtgaagagtatcagaagacatggtatcacgagggccctaccaccctgaaagtc
gcccgtctgtggattgcacaatactcccttccgcgggcgatggagcgtctggaggctgcc
cgagaataccggaatatcccagaatccacaaggacctctcagaaacaagagctgcacaaa
tctctcggatcccttaacaacttttgcagccaaattggagatgacagacctttgtcattc
tgtcattttagtcctaattctaaacttctggctacagcatgttggagtggactttgcaaa
ctgtggtcagttccagattgtacccctgtgcgcacattaagaggacataacacaaatgtg
ggagccattgtgttccaccccaaatccacaatatcattggatgagaaagatgtgaatctg
gcttcctgtgctgcagatggatctgtaaaactatggaacctggagagcgatgaaccagtt
gcagacattgaaggtcacgctgtgagggtagcgagagtgacatggcatccatctgggcgt
ttcttggggaccacatgctatgaccgttcatggcgcttatgggatctggaagctcaggaa
gagattctgcatcaggaaggacacagtaaaggggtgtatgacctttctttccacgtagac
gggtctctggccggaaccggaggcctggattcttttggtcgagtttgggatctgaggact
ggtcgctgcatcatgttcctggaaggtcatctcaaagagatctatgggatcagcttctcc
cctaatggttaccatatagcaacaggcagtggtgataacacctgcaaagtgtgggatctg
cgtcagaggcgctgtatctataccatccctgctcatcagaacttgatcagtggagtgaag
ttccagcctactaatggtcagtatctcctgactgcatcctatgataacacagccaaggtg
tggactcaccctctctggtctccattgaagaccctggctggacacgagggtaaggtgatg
ggggtggacatctcacatgatggcgagcttattgccacctgctcctacgatagaactttt
aagctgtggacggcggagtga
DBGET
integrated database retrieval system
