Rana temporaria (common frog): 120914178
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Entry
120914178 CDS
T07929
Symbol
ZER1
Name
(RefSeq) protein zer-1 homolog isoform X1
KO
K10350
Zyg-11 protein
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120914178 (ZER1)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
120914178 (ZER1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
ARM_ARMC5
HEAT_EZ
Lentiviral_Tat
Motif
Other DBs
NCBI-GeneID:
120914178
NCBI-ProteinID:
XP_040180658
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Position
9:144077937..144184452
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AA seq
767 aa
AA seq
DB search
MATDSPESLMTICTDFCLRNLKGTLCYLLDNEVLKLHPDIFLPSEISDRLVNEYIELVNA
DSGFEPHESFFTLFSEPQSTRLTRLHLREDIVQDQDLEAICKQDLVELYLTNCERLTAKS
LQTLSHFKSTLVSLSLFGCSNIFFEEENLGRYNDTDCLVNPSRQILSRDFSFQGFGHLRF
LNLGCITKGVDVKMMVRPLMCLKALNLSGIQMNDIGFLTQWKDTMVSLVLYNMDLSEEHI
QVLVQLNKLRHLDISRDRLSTYYKFKLTRKVLSLFVQNLEELVSLDISGHMMLENCAISK
MDDELGPASTDPSKSSITPFRSLKKPLQFLGLFETSLCRLTHIPAYKVSGDKNEEQVLNA
IEAYTEHRPEITSRAINLLFDIARIERCNQPLRALQLVIAALKCHKYDKTIQVTGSAALF
YLTNSDYRSEQSVRLRRQVIQVVLNGMESYQEVTVQRNCCLTLCNFGIPEELEFQYHRVN
ELLLNILIPTRQDESIQRIAVHLCNALVCQVDNDHKEAVGKMGFVMTMLKLIQKKLQDKT
CDQVMEFSWSALWNITDETPDNCEMFLNYSGMKLFLDCLREFPEKQELHRNMLGLLGNVA
EVRELRPQLMTSQFITVFSNLLDSKADGIEVSYNACGVLSHIMFDGPEVWFILEPSRQEV
EERMWRAIQSWDISSRRNINYRSFEPILRLLPQCVSPISQHWATWALYNLVSVYPDKYCP
LLIKEGGLPLLVDVVNMPTTRQETKDMARKVLQHCGNYNEESMDTLL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagacagccccgagtctttgatgaccatctgtactgatttctgcctccgaaac
ctaaaggggaccttgtgctacctcttggacaatgaggtcctgaagctacatccagatatc
ttcttacccagcgagatcagtgaccggctggtgaatgagtacatcgagttggtgaatgca
gacagtggttttgagccacatgaaagcttttttaccctgttctcagagccacagagcaca
agactcacccggctacatttaagggaggacattgtccaggatcaagacctagaagccatc
tgtaaacaagaccttgtagaactgtatcttacaaactgtgagaggctaacggccaagagc
ctgcagaccctgtcccactttaaatccactctggtgtccctcagcctttttggctgcagc
aacatcttcttcgaagaggagaacctgggccgatacaatgataccgactgcctggtgaac
cccagtcgacagatcctgtcccgggacttcagttttcagggattcggccatcttcgcttt
ctaaatctcggttgtatcaccaaaggcgtagatgtgaaaatgatggtgcgtccgcttatg
tgtttaaaggctttgaatctgtcaggaattcagatgaatgacatcggctttctgactcag
tggaaggacacaatggtgtctcttgtcttgtacaacatggacctctccgaggagcacata
caagtccttgtgcaattgaataaactccggcacctggatatttcccgtgatagactatcc
acctattacaagttcaaactgactcgcaaggtgctaagcctatttgtgcaaaatcttgaa
gagcttgtatccttggacatctctggtcacatgatgttggagaactgtgctatttccaag
atggatgatgaattgggccctgcaagcactgaccccagcaagagcagtatcactccattc
cgcagtttaaagaaacctttgcagttcttgggcctctttgaaacatctctatgtcgccta
actcacatcccagcttacaaggtgagtggagataaaaacgaggagcaagttctcaatgcc
atagaagcatacactgagcatcgccctgagatcacctctcgtgccataaatctgcttttt
gatattgctcgtattgaaagatgcaaccagccactaagggccctgcagctggtaattgct
gccctcaaatgtcacaagtatgataaaacaattcaggtgacaggaagtgccgccttattc
tatcttacgaactctgactaccgtagtgaacagagtgtccggctccggcggcaggtcatc
caggtggtgctaaatggcatggagtcctatcaggaagtgacggtgcagagaaactgctgt
ctcacactgtgtaactttggcatcccagaggagctagaattccagtatcatcgggtgaat
gaactgcttctgaacattctgatcccaacccgtcaggatgagtccatccaacgcattgct
gtgcatttgtgtaacgcgctagtctgtcaggtggataatgaccacaaggaggcagtgggg
aagatgggctttgtcatgactatgcttaagttgatccagaagaagctgcaagacaaaact
tgtgaccaagtcatggaattttcctggagtgcgctgtggaacattactgatgagactcca
gataactgtgagatgttcctcaactacagtggcatgaagctgttcctagactgcctgagg
gaatttccagagaagcaagaacttcatcgcaacatgctagggcttctgggtaatgtggca
gaggtacgcgaactgcggccacagctgatgacatcacagtttattaccgttttcagtaac
ctcctggacagtaaagcagatgggattgaagtgtcgtataatgcctgcggggtgctttca
cacatcatgtttgacggcccagaagtttggttcattttggagccatcaagacaggaggtt
gaggaacgcatgtggcgagccatccagagctgggatataagctccagaaggaacattaat
taccggtcatttgagccaattcttcgtcttctgccccagtgtgtttcccccatcagccaa
cactgggcaacgtgggctttgtacaaccttgtatctgtatatccagacaaatattgtcct
cttctaatcaaagaaggtgggctccctctgctggtggatgtggtcaacatgccaactaca
cgccaagaaaccaaggatatggctaggaaagtgcttcagcattgtggtaattataatgaa
gagagcatggacacgttactataa
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