Rana temporaria (common frog): 120914205
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Entry
120914205 CDS
T07929
Symbol
CERCAM
Name
(RefSeq) inactive glycosyltransferase 25 family member 3
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00310
Lysine degradation
rtem00514
Other types of O-glycan biosynthesis
rtem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120914205 (CERCAM)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120914205 (CERCAM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtem01003
]
120914205 (CERCAM)
Enzymes [BR:
rtem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120914205 (CERCAM)
Glycosyltransferases [BR:
rtem01003
]
O-Glycan biosynthesis
O-linked Gal type
120914205 (CERCAM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
120914205
NCBI-ProteinID:
XP_040180703
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All DBs
Position
9:complement(146018326..146052341)
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AA seq
584 aa
AA seq
DB search
MASSALLLLLLLLPGPLLAADPSHPSLVIALLARNAAHALPYSLGALERLDYPKERISVW
CVSDHNEDATIDVLQTWVEAVRPFYHSVVWTAQRMPRWYAQETTPKHWPAERYEHVMKLR
QEALNYARESKADFILFTDADNVLTNDQTIQLLMAENKTLVAPMLDSQTGYSNFWCEITP
QGFYRRTPDYFPTKNRQRTGCFPVPMVHSTFLLDLRKEETHKLAFYPPHPNYTWSYDDII
VFAFSYLASGVQGYICNHHRYGYVNIPALPHQEIEDDKLNFAHMILEAMVEGYPFVSSQY
VSPLPKNPDKMGFDEVFLINLLRRPERRERMLRSLYEQEISNRVIDAVDGSALNSSHIKR
MGVNLLPGFYDPFSGRTLTKGEVGCFLSHYKIWQEIVDKQLEATLVFEDDVRFESFFKRK
MIRLLSEVRTAQLDWDLIYIGRKQVTTDPEKAVENVRNLVVADYSYWTLCYMISLQGAQK
LLNAEPLSKMLPVDEFLPIMADTHPNEEYKSYFSNRNLRVFSVQPLLVFPIHYTGEPNWQ
SDTETSTLWDDDSVRTDWSGSQKTLKDIRRNVHSGMQSPSRDEM
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctccgctctcctgttgcttcttctcctcctgcccggtccgctgctggccgcc
gatccttcccatccctccctggtcatcgccctcctcgcccgtaatgcggcgcatgctctg
ccctacagcctgggggcgctagagagactggactaccccaaggagaggatctccgtctgg
tgtgtcagtgaccacaatgaagacgcaaccatcgatgttctgcagacctgggtggaggcg
gtgcggccattctatcactctgtggtgtggacggcacagcggatgcccaggtggtatgct
caggagacgacccctaagcactggcctgcagagcgatatgagcacgttatgaagctgcgc
caggaggccttaaactacgcaagggagagcaaagccgacttcatcttgtttactgatgca
gataacgtgctgaccaatgaccaaacaatccagcttcttatggcggagaataaaaccctg
gtcgcccccatgttggactcccagacagggtactctaacttttggtgcgaaataacaccc
cagggattttatcgtcgtacaccagattacttcccaaccaaaaaccggcaaagaactggc
tgttttccagtgcccatggtccattctactttcctcctggaccttcgtaaagaagagacc
cacaaactggccttctatcctccccatcctaattacacctggtcctatgatgacatcatt
gtgttcgccttttcctacctggcttcaggagtacagggctacatatgtaaccaccaccgc
tatggttatgtcaacatcccggctttaccgcatcaggaaattgaagatgacaagctgaat
ttcgcccacatgatactggaagccatggtggaaggatatccatttgtttcttctcaatat
gtgtctcctctaccaaagaatcctgacaaaatggggtttgatgaggtgtttctgattaat
ctgctccgtcgtccagagcgtcgggaaagaatgctgcgctctctatatgaacaggagata
tccaaccgtgtaatagatgctgttgatggaagtgctttgaacagcagtcacatcaaacgt
atgggagtaaatctactaccaggattttatgatccattctctggtcggactcttaccaaa
ggggaggtgggctgttttctgagccattacaagatctggcaagagattgtagataaacag
ctggaagcgaccctagtgtttgaagatgacgtgcgctttgaatcgtttttcaagcgaaag
atgatccgtcttttgagtgaagttcgcacggcccagctggactgggacttgatatacatt
ggaagaaaacaagtcactacagatcctgagaaggcggtggagaatgtgcggaacttggtg
gtggcggattactcctactggactctctgttatatgatctccctgcagggagcacagaag
ttgctgaacgctgagccgttatctaagatgctcccagtggatgaattcctgcctatcatg
gcagacacacacccaaatgaggaatacaaaagctatttttccaaccgaaacttgagagtg
ttctcagtccagccgctccttgtctttccaatccattacaccggagaacccaactggcag
agcgacaccgagacctccaccctctgggatgatgacagcgtgcggacggattggagcgga
tcacagaagactctgaaggatataaggagaaatgtacatagcgggatgcagtcgccgtca
cgagacgagatgtga
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