Rana temporaria (common frog): 120914449
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Entry
120914449 CDS
T07929
Name
(RefSeq) nyctalopin-like
KO
K08129
nyctalopin
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtem00535
]
120914449
Proteoglycans [BR:
rtem00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
120914449
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_14
VirC1
Motif
Other DBs
NCBI-GeneID:
120914449
NCBI-ProteinID:
XP_040181075
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All DBs
Position
9:63811536..63814183
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AA seq
428 aa
AA seq
DB search
MLPSSRSLADRILALRIYLISVIFSGCPVLEINSEFRNFTCPSLCRCNADHDIYCVKMGI
EDLPPDLPPSAVSLNLAGNQIRILHFDAFKVVPSLHILWLNQNNLTFLYPGVFIALNSLK
ELNLSRNQRLTYLHAHTFRGLSSLLSLDLSHCNIFEIHPLVFTHLPSLEVLNLASNKIHY
VPQALRKLHNVTRLSMENNLIEAIGKNSFKHQQALQALNLRRNQIWAIQHEAFNQLNKLS
VLNLGHNSLSHLPNQLFSGLDQLKIMYLEANRIDKINCSFNMLVNLKKLHLNNNLITHIT
RNAFSDLKQLQVLHLNKNSLTSVPSYLFLHMPQLKSVYLSFNPWSCDCSMAWIATWMVDY
KGIVQGLNCVFALSYKSTEVFTGHGVTCPQEEITEDKCVGSLNDSASALTDTSYIIFSIL
ICFIGGLK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgccatcatccaggtcacttgcggacaggattttagctctgagaatttacctgatc
tcagtcattttcagtgggtgcccagttcttgagatcaatagtgaattccgaaacttcacc
tgtcctagcctgtgccgttgtaatgctgatcatgacatatactgtgtaaaaatgggcatt
gaagaccttccaccagatctacctccctctgcggtatctttgaacttggcaggaaaccaa
atacggatccttcattttgatgctttcaaggttgtcccttcccttcatatcctgtggctg
aaccagaacaacttgacattcctatatcctggtgttttcattgcactcaacagcttaaaa
gagttaaatcttagtaggaaccaaaggctgacctaccttcatgcccacacgttccgaggc
ctctcaagccttctgtctttggatctgtctcactgcaacatttttgaaatccacccgttg
gtgttcacccacttgccatctttggaggttctcaatttagcatccaataagatacattat
gtgccgcaagccttgagaaaactgcacaatgtcaccaggttgtcaatggaaaataatctc
atagaagccatagggaagaattccttcaaacatcaacaagccttgcaagctcttaatcta
cgaaggaaccagatttgggccatacaacatgaagccttcaaccagctaaacaaattgagc
gtgctaaatttaggacataactctctatctcatttgcctaatcagcttttcagtggattg
gatcagcttaagattatgtacctggaagctaacaggattgataaaatcaactgctccttt
aacatgctggttaacctcaaaaagttgcatctcaataacaatctgataacacacattacc
cgcaatgctttttcggatctaaaacaactgcaggttctacatttaaataaaaatagcttg
acttctgttcccagttacttgttcttgcatatgccccaactgaaaagtgtctacctttca
tttaacccttggagctgtgactgcagtatggcctggattgccacctggatggtggattat
aaaggaatagttcagggtctcaactgtgtctttgccttgtcatataaatcaacagaagtt
ttcacaggacatggagttacctgcccccaagaagaaattactgaggataaatgtgtggga
agcttaaatgattctgcttctgctttaactgatacgtcatatataatatttagcatacta
atatgctttattggtggattaaagtag
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