Rana temporaria (common frog): 120915165
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Entry
120915165 CDS
T07929
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04140
Autophagy - animal
rtem04148
Efferocytosis
rtem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120915165 (VPS11)
04148 Efferocytosis
120915165 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120915165 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120915165 (VPS11)
Membrane trafficking [BR:
rtem04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120915165 (VPS11)
Hops complex
120915165 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
zf-RING_2
TPR_Vps41
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
TPR_GEMI5
DLP_helical
PH_20
zf-ANAPC11
Beta-prop_EML_2
zf-RING-like
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
120915165
NCBI-ProteinID:
XP_040181377
LinkDB
All DBs
Position
10:71637026..71697995
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AA seq
914 aa
AA seq
DB search
MAVYLQWRRFVFFEKESVRFPGEGGKALSLPPGIIVCDSGRGSLLFGDMTGQIWFLSRSL
QLTSFQAYKLRVTHLHQLKQHNILVSVGEDEEGTNPLIKVWNLEKRDGGNPLCTRIFPAI
PGNKPTVVSCITVHENLNFMAIGFADGSVVLTKGDITRDRHSKIQILQEGSYPVTGMAFR
QTGKMTHLFVVTTENVKAYELTPKDYPFTELDSHGCGLRCSALSDPSQDMQFVVAGNECV
YLYQPDERGPCFAFEGQKLIVHWYRGYLIIVTRERSDFAARSGDTHAPDRQTLTIYDLGN
KLIAYSCTLTEVVDVLAEWGSLYVLTRDGLLHAFHEKDTQTKLEMLFKKNLYVMAISLAK
SQHLDSDGLSEIFRQYGDHLYNKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTA
YLQALHLQSLANADHTTLLLNCYTKLKDSAHLEEFIKASVDEVHFDVEIAIKVLRQAGYH
SHALYLAEKHAHHEWYLKIQLEDIKNFQEALRYIGRLPFPQMESNMKCYGKILMYHVPNE
TTQLLKDLCTNFAQHEGGKKANPEEFIPIFANNPCELKNFLEHMIQVQNDSPQGVYDTLL
ELRLQNWAHERDPQARLQLQNDVMTLLKSGRFKNVFDKALVLCQMHNFQKGVLYLYEQGK
LFQQIMHYHMQNNQYQEVIEACKQYGEQESSLWEQALGYFARKEEDCKEHIATVLRHIES
KNLMPPLLVVQTLAHNSTATLSVIRDYLINKMQKLSQQTEEDERTVNKYREETARIRRDI
HELRNSPKIFQKTKCSICSSALELPSVHFLCGHSFHQHCFESYAESDSDCPTCMPENRQV
LDMIRAQEEKKDLYDHFQHQLKYSNDGFSVVADYFGRGVFNKLTLITDAPSEKSRITKDV
GLQRDLLINTRRNV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtacctgcagtggaggcgcttcgtgttctttgagaaggagtcggtgcggttc
cccggggagggcgggaaggctctgtccctgccgccggggattatagtgtgtgactccggg
cggggcagcctgctgtttggggatatgacagggcagatttggttcttgtctcggtccctt
cagctcacctccttccaggcttacaaacttcgtgttacccatcttcatcaactcaaacaa
cacaatatccttgtttctgtaggggaggatgaagaaggcacgaacccgctgattaaagtt
tggaatttggaaaaacgtgatggtggtaacccactttgcactagaatttttccagccatt
cctggcaataaacccacagttgtgtcctgcatcacagttcatgaaaacctcaacttcatg
gctattggttttgcagatgggagcgtggtgttaaccaagggtgacataacacgtgaccga
cacagtaagatccaaattttgcaagaagggagctatcctgttacaggcatggctttcagg
caaactggcaagatgacccatctatttgttgtaacaacagaaaatgtgaaggcttatgag
ttgacacctaaggattacccattcacagaactagattctcatggctgtgggctgcgttgc
tcagctctgtctgatccatctcaagacatgcaatttgtggtggctggtaatgaatgtgta
tatttataccaaccagatgagagagggccctgctttgcttttgaaggacagaaattgatt
gtgcattggtatcggggctatcttatcatcgtaaccagagagagatcagactttgctgca
cgctcgggagatacccatgcacctgacagacagacattgacaatttatgatttgggaaac
aagcttattgcatacagctgcacactgactgaggtggttgatgtcttagctgaatggggt
tctctttatgttctgacgcgtgatggcctcctgcacgctttccatgaaaaggacacacag
actaaactagagatgctgtttaagaaaaacctgtatgtaatggccatttctctggcaaaa
agtcagcacctggacagcgatggattgtctgagatctttcgccagtatggagatcatctg
tataataaaggagatcatgatggggctatccaacaatatatccgaacaattggaaaatta
gagccttcctatgttatccgaaaatttctagatgcacagaggatacataatttgaccgcg
taccttcaggctttgcatttacaatctctagccaatgcagaccacaccactctcttacta
aactgctatacaaagctaaaggacagcgctcatctggaggagttcattaaagcgagtgtg
gatgaggtacattttgatgtagaaatagctattaaggtccttcggcaagctggttaccat
tcacatgccctgtacttggcagagaagcatgcccaccatgaatggtacttaaaaatacag
ctagaagatatcaagaattttcaagaagctttgagatacataggacgccttcccttccct
caaatggaaagtaatatgaaatgctatggaaagatacttatgtatcatgtgcccaatgag
acaacacagctgttgaaagacttatgtaccaactttgctcagcatgagggaggaaagaag
gcaaatcctgaagagttcattcctatttttgccaacaatccttgtgaattaaagaacttt
cttgaacatatgatacaagtacagaatgattcgcctcaaggggtatacgatactttgctg
gaattacgtctgcaaaactgggcacatgagcgagacccacaagcaaggctgcaactccaa
aatgatgtcatgacgcttctgaagagtgggcgctttaagaatgtgtttgataaagctctt
gtcctatgccaaatgcacaattttcagaagggtgtgctgtatttgtatgaacaaggcaaa
ctttttcagcagattatgcattatcacatgcaaaacaatcagtaccaagaagtgattgaa
gcttgtaaacagtatggagagcaagagagttctctgtgggagcaagcgcttggttatttt
gcccgcaaagaggaagattgtaaggaacacattgccactgtgctgagacatatcgaaagc
aaaaatctcatgcctccactattagtggtgcagaccctggctcataattccacagccact
ctgtcagtgatcagggactatttaatcaacaaaatgcagaaactgagccagcagacagaa
gaagatgaaagaactgttaataagtacagggaggaaacggctcgtattcgccgagatatc
catgaactgcgtaacagccccaagattttccagaagactaaatgtagtatctgcagtagt
gctctagaacttccgtctgtgcacttcttgtgcggtcattcatttcaccaacactgcttc
gagagctatgcagagagtgactccgactgcccaacctgcatgcctgagaatcgccaagtc
cttgatatgatcagggcccaggaagagaagaaagacctctatgaccatttccagcaccag
ctgaaatactccaatgacggattcagtgtggttgcagactattttggccgtggtgtgttc
aacaagcttacgctaattacagatgccccttcagaaaaatccagaataactaaggatgtg
gggttacaacgggacctgcttataaacaccagaagaaatgtttaa
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