KEGG   Rana temporaria (common frog): 120915204
Entry
120915204         CDS       T07929                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rtem  Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rtem03041]
    120915204 (SMU1)
Spliceosome [BR:rtem03041]
 Complex B
  Other components
   Complex B specific factors
    120915204 (SMU1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd LisH_TPL Beta-prop_RIG_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_Vps41 Ge1_WD40 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_VPS8 eIF2A Beta-prop_IP5PC_F TFIIIC_delta DUF7165 VPS8_N WD40_like LisH LisH_PAC1 Beta-prop_NOL10_N PROPPIN Cytochrom_D1 LisH_WDR26 zf_topless
Other DBs
NCBI-GeneID: 120915204
NCBI-ProteinID: XP_040181449
LinkDB
Position
1:complement(430003623..430032486)
AA seq 513 aa
MSIEIESSDVIRLIMQYLKENNLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLVDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTIKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKMWNMKTTECVNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtccatcgagatcgagtcgtccgacgtcatacgtcttatcatgcaatacctaaaagaa
aacaatttgcatcgtgcattggctacattgcaagaggaaacaacagtgtctttaaacacc
gtggacagtattgagagttttgtggcagacattaacagtgggcactgggatacagttctg
caagctatacagtctcttaagctgccagacaagacactcgtagatctatatgaacaggtt
gtattggaattgattgaactccgtgaattgggagctgctagatctcttctgaggcaaact
gaccccatgatcatgttaaaacagacccagcctgaaagatacattcacttggaaaacctc
ttggctagatcatattttgacccacgtgaggcttatcctgatggcagcagcaaagaaaag
agaagagcagcaatagctcaggcccttgctggagaagtgagcgtagtgcctccatcacgt
ctcatggcactcttgggacaggcattaaaatggcagcaacatcagggacttttgccccca
ggaatgaccattgatttgtttagaggtaaagcagctgtgaaagatgtagaggaggagaag
ttccccactcagctcagcaggcatatcaagtttggtcagaaatcacacgtggaatgtgct
cgcttttcacccgatggtcagtatttggttaccggatctgtagatgggtttatcgaggtg
tggaactttaccacaggaaagatcagaaaggatttgaaataccaggctcaagataacttc
atgatgatggatgacgctgtattgtgcatgtgctttagcagggatactgaaatgctggct
acaggagcacaggatgggaaaatcaaggtgtggaagattcagagtgggcaatgtttaagg
agatttgaacgtgcgcacagtaagggtgtgacatgccttagcttctctaaagacagcagt
cagatcctcagtgcttcttttgaccaaactatcagaattcatggcttgaaatctggcaaa
acaattaaagaattccgaggacattcgtcgtttgtgaatgaggccacgttcactcaggat
ggtcactatatcatcagtgcatcatcggatggcacagtaaagatgtggaacatgaagaca
acagagtgtgtcaataccttcaagtcacttggaagcactgcgggaacagacatcacagtc
aacagtgtcattctcttgccgaaaaatccagagcactttgtcgtgtgcaatcgctcaaac
acagttgtgattatgaatatgcaaggacaaattgttagaagcttcagctctggtaaaaga
gaaggtggtgactttgtgtgctgtacactatcgcccagaggagaatggatctactgtgtt
ggagaggattttgtgctatactgtttcagcacagtaactggcaagctggaaagaaccttg
actgtccatgagaaggatgtcataggaattgcacatcatcctcatcagaatttgattggc
acctatagtgaggatggactactgaaactctggaaaccttaa

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