Rana temporaria (common frog): 120915466
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Entry
120915466 CDS
T07929
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
rtem04514
Cell adhesion molecule (CAM) interaction
rtem04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120915466 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120915466 (NCAM1)
04517 IgSF CAM signaling
120915466 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120915466 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtem04515
]
120915466 (NCAM1)
04090 CD molecules [BR:
rtem04090
]
120915466 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
rtem00536
]
120915466 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtem00537
]
120915466 (NCAM1)
04091 Lectins [BR:
rtem04091
]
120915466 (NCAM1)
Membrane trafficking [BR:
rtem04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
120915466 (NCAM1)
Cell adhesion molecules [BR:
rtem04515
]
Immunoglobulin superfamily
NCAM1/2
120915466 (NCAM1)
CD molecules [BR:
rtem04090
]
Proteins
120915466 (NCAM1)
Glycosaminoglycan binding proteins [BR:
rtem00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
120915466 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtem00537
]
Others
120915466 (NCAM1)
Lectins [BR:
rtem04091
]
I-type lectins (Siglecs)
120915466 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_PDGFR_d4
C2-set_3
Ig_C17orf99
Ig_5
V-set_CD47
C1-set
Pur_ac_phosph_N
C2-set
Collagen_bind_2
Motif
Other DBs
NCBI-GeneID:
120915466
NCBI-ProteinID:
XP_040181937
LinkDB
All DBs
Position
10:114625949..115018922
Genome browser
AA seq
1106 aa
AA seq
DB search
MLHTKDLIWTLCFLGAAAALEVTIVPEQGEIALEESKFFLCQVTGEASEIYWESPSGERL
NNQQQISVIRSDDYSSTLTIYNASIQDAGTYKCIATGPEGRGESTVKLQIYQKLTFKNAP
TPQEFNEGTDAVIICDVSSSMPSIIIWKHKSRDVAFKKDVRFVMLSNNYLQIRDIKKTDE
GTYRCEGRILARGEINFKDIQVVVNVPPTVEAKQLTINATANLGESVTLGCLADGFPEPE
ISWTKKGELIEEVGDKYTFNEDMSEMTIHRVEKDDEAEYICIAENKAGDNEATVLLKVYA
KPKITYVENKTAVELDNEITLTCEASGDPLPSITWRTATRNISEEDKASWTRPHKKETFD
GRIVVQGHIRMSSLTLKDIQYTDAGEYFCIASNTIGQDTQAMYFEVQYAPKIKGPVVVYT
WEGNSVNITCEVLAYPTARVSWLRDGQLLPSSNFSNIKIHSSPLASSLEINPDSESDFGN
YNCTAVNSVGQESSEFILVQAETPSSPTILKVESYSSTAMVEFEEPDSTGGVPILKYKAE
WRATGAETWQTANFSARDESSESSLTITGLRPETSYVVKLSAINGKGIGESSPLFEFITQ
PVHILHPREPSAPKLTGRVGDDGNSFKVVLIKQDDGGSPIRHYIVRYRAKNSLDWKPETK
IASESDHITLRSLDWNAEYEVVVVAENQQGKSKAAIFNFRTTTKPTIIPATTSTNTGLSM
GAIAGILIVVFVLLLVAVDVTCYFLNKCGLLMCIAVNFCGKAGPGAKGKDIEEGKAAFSK
DESKEPIVEVRTEEDRTPNHDGSNQTEPNETTPLTEPEHPADTTATVEDMLPSVTTVTTN
SDTITETFATAQNSPTSETTTLTSSSAPPPTSAPDSNSVQSSQATPSKTEASSASLPPAA
SSPKVAPLVDLSETPSTNNPSTTVASPGGVLNPTAATTVAEPPKAVARPSAPVPPSTTSP
PATPEKGKQEPSGTKSPEKEAAQTSTVKSPTEATKSEAASVSNTNPSQGEDFQIDGGTFK
TPEIDLAKDVFAALGTSSSAAVASGKAPELASSTADTTVPPASSKTEKAPVEENSKPEES
DTKSTPAEVKTVPNEATQTNANESKA
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacactaaggatctcatctggactttatgtttcctcggagctgcagcagcccta
gaagttacaatagttcccgaacaaggagaaatagccctggaggaatctaaattcttctta
tgccaagtaactggtgaggcttcagaaatctactgggaatcaccttctggagaaagactg
aacaaccaacagcagatctcagtaataagaagtgatgactattcatccactcttactata
tacaatgccagcattcaagatgctgggacctacaaatgtatcgctaccggtccagaagga
agaggagaaagcactgttaaacttcagatttatcagaaattgacattcaagaatgcaccc
accccgcaagagtttaatgaaggaacagatgctgttatcatttgtgatgtatcaagttct
atgccatccattatcatctggaaacacaaaagcagagatgtagcttttaaaaaagatgtt
cgatttgttatgctgtccaacaattacctgcaaattcgggacattaaaaagacagatgaa
ggaacttatcgatgtgaaggacggatcctagcacgtggagagatcaacttcaaggatatc
caagtcgtagtgaatgttcctcctacagtggaagccaaacaactgacaataaacgccaca
gccaacttgggagagtctgttactttgggctgtttagctgatggctttcctgagcctgaa
ataagctggacaaagaaaggagaactgatagaagaagttggtgataaatacaccttcaat
gaagacatgtcagagatgactattcatcgtgtggaaaaagatgatgaagctgagtatatc
tgtattgctgaaaataaagctggtgacaatgaagctaccgttctcctgaaagtctatgca
aaacccaaaatcacctatgttgaaaacaagactgcagtggagctggataatgagatcacc
cttacatgtgaagcctctggagacccactacccagcatcacttggagaacagctaccaga
aacatcagtgaggaggataaggcttcgtggacacggccccacaaaaaagagacttttgat
ggacgaatagtggtacagggacatatcaggatgtcctctctcactcttaaggacatccag
tacaccgatgccggcgagtatttttgcattgctagtaacaccattggacaagacacacaa
gccatgtactttgaagttcagtatgctcccaaaattaagggtccagtggtggtttacacc
tgggagggaaattctgtaaatatcacttgcgaggtgcttgcctaccctactgcaagagtg
tcctggctcagggatggacaacttctgccaagttctaacttctccaacatcaagattcac
agcagtcctttagccagcagccttgagataaacccagactctgaaagtgattttggaaac
tataattgtactgcagtcaacagtgttggtcaagagtcttctgagttcattcttgtacaa
gcagagaccccatcatcaccaactattctcaaggtggaatcttattctagcacagctatg
gttgagtttgaagaaccagattccactggtggagtgcccattcttaagtacaaggcagag
tggagagcaacaggagcagagacatggcagactgccaatttcagtgcccgggatgagagt
tcagagagttctcttacaataactggactcaggccagaaacatcttatgttgtgaaacta
tcagctatcaatggcaagggtattggcgaatcatctccactctttgaatttatcacccag
ccagttcatattttacatccacgggaaccaagtgctccaaagttgacaggccgtgttgga
gatgatgggaactcatttaaagttgtcttgatcaagcaggatgatggtggctcccctatc
cgccactacattgtccgttacagagctaaaaattccctggactggaaaccggagactaag
atagcctcagaaagtgaccacatcacgctgcgatctctagactggaatgctgagtatgaa
gttgttgtggtagctgagaatcagcaggggaagtcaaaggcagctatcttcaattttcga
accacaacaaagcccacaattattccagctaccacaagcaccaacactggactgagtatg
ggagccattgcgggtatcctcattgtggtctttgttcttctcttggtggctgttgatgtg
acctgctacttcctgaacaaatgtggtctgcttatgtgtattgctgtcaatttctgtgga
aaggctggaccaggagccaagggcaaggacattgaagaaggaaaagcagctttttcgaaa
gatgagtctaaagagcccattgttgaggtgcgaacagaagaggacaggacaccaaaccat
gatggaagcaaccaaacagaacccaatgagaccactccattaacagagcctgagcatcca
gctgacaccacagctactgttgaggatatgctgccatctgttaccaccgtcacaactaac
tctgacactattactgaaacctttgcaactgcacaaaacagtcccaccagtgagaccacc
actctcacctctagctcagccccaccacccacatctgctcctgactcaaactcagttcag
tccagtcaggcaacgccttctaaaacagaggcatcttcggcctccttacctccagctgca
tcttctccaaaagtggctcctttagtagatctcagtgaaaccccatctactaacaaccca
tctactactgtagccagtccagggggagtcctaaatcctactgctgcaaccactgtagct
gagcctccaaaagcagtagccaggccttcagctccagttccaccaagtaccactagtccc
ccagctactcctgaaaaagggaagcaggaaccatcaggtaccaaaagcccagaaaaagaa
gcagcacagaccagcacagtgaaaagtccaacggaggctactaagagtgaggcagcttct
gtcagcaacacaaatccctcccagggtgaggactttcaaattgatggggggaccttcaag
actccagaaattgaccttgcaaaggatgtttttgcagctcttggaacttcttcttctgcc
gctgtggctagtgggaaagctcctgagctggcttcttccactgcagacaccactgtaccg
cctgcttcatcaaagaccgagaaggcccctgtagaagagaactctaagccagaagaatca
gacactaagagcaccccagcagaagtgaaaacagtccccaatgaagccactcaaacaaac
gcgaacgagagtaaagcatga
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