Rana temporaria (common frog): 120915550
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Entry
120915550 CDS
T07929
Symbol
CRTAM
Name
(RefSeq) cytotoxic and regulatory T-cell molecule isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120915550 (CRTAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtem04515
]
120915550 (CRTAM)
04090 CD molecules [BR:
rtem04090
]
120915550 (CRTAM)
Cell adhesion molecules [BR:
rtem04515
]
Immunoglobulin superfamily
Nectin family
120915550 (CRTAM)
CD molecules [BR:
rtem04090
]
Proteins
120915550 (CRTAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
I-set
Ig_2
V-set
ig
C2-set_3
C1-set
DUF6377
TMEM51
Mem_trans
GRP
Baculo_11_kDa
DUF2615
DUF3377
Motif
Other DBs
NCBI-GeneID:
120915550
NCBI-ProteinID:
XP_040182065
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All DBs
Position
10:complement(120892865..120950910)
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AA seq
439 aa
AA seq
DB search
MIVFALLCVLGALLKGEAKVLYSRVSVEEGRTLILRCAFPGSNSSAMQWLTPRGYVTFFN
SEKVLKDRRLQLIRSSRNRLVISISNITRDDEGVYTCLHYSMPVKAKEVNVTVRATPSQP
IIEVVQISRKSSKDEIVLNCSTSGGRPCPRITWLVGHTELSGNRKASFQGDDKKCTASST
LRINAFTHRSTVTCVVRHRSFSMGNSTATFNFSNLLTATEAGNTPIDQTTAHVPHSAEVT
TSMISSEQSFTGGYGVTTTGGEEGNPTTDITSMTYPEWNTTLENPMTGEDKEDRTNATGR
ETLPAGDITTQQNETTEAVTYSAFTDINTTWYIQLDNVTGISQSRTAEFEASRGKSNSTV
ILILVSLMICVLLVTVHLFLMKLKKAHEAWKKENENSDQTLESNKSKSNNEDAPGPVRNG
QGATNQNGSGIKYNSQVSM
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgttcgcactgctctgtgtgctgggggctctgctcaaaggggaagcaaaagtt
ctgtactctcgtgtgtctgtggaggaaggaaggaccctcattcttagatgtgcgtttcca
ggaagcaacagctccgccatgcaatggctcacaccaaggggatatgtcaccttcttcaac
agtgagaaagttttgaaagacagaagactccaattgatcaggtcatcacggaacaggctt
gttatcagtatatccaatattaccagggacgatgaaggcgtgtatacgtgtttacactac
agcatgccagtgaaagccaaagaggtcaacgttacagtacgggctaccccttcccagcct
atcatagaggtcgttcagatctccagaaaatcctctaaagatgaaattgtcctaaactgc
tcgacctccggcggccggccctgccccaggatcacatggctggtgggtcacaccgagttg
tcaggcaatagaaaagcgtcgttccagggggatgacaagaaatgcacagcgagcagcacc
ttgcggatcaacgcttttactcacagatcaacggtcacttgtgttgtgaggcacagaagc
ttctccatgggaaactccacagccacgttcaatttcagcaacctattgacggccaccgaa
gccgggaacacaccgatcgaccaaactacggcacatgttcctcactctgcagaggtcaca
acttccatgataagctcagagcaaagctttacagggggatatggtgtgaccaccacagga
ggagaagaaggaaacccaactacagatatcacgtctatgacatacccagaatggaacaca
acattggaaaaccccatgacaggcgaagataaagaagatcgaactaacgctactggacga
gaaacattaccagctggtgacatcaccacacagcagaatgagaccacagaggccgtgacc
tacagtgccttcacagacattaacactacgtggtacattcagttggataacgtgactgga
attagccagagcagaactgcagaatttgaagcctctagaggaaagtcgaacagtactgta
atcctgattctggtgtcgctgatgatctgtgtgcttctggtcactgtacatctttttctt
atgaagctgaaaaaagcccatgaagcctggaagaaagagaatgaaaattcggatcagact
ctggagagcaacaaatccaagtcaaataatgaagatgctcctggtccagtaaggaatggt
caaggggccacaaatcaaaatggatccggaattaagtacaacagccaggtttccatgtga
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