Rana temporaria (common frog): 120915695
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Entry
120915695 CDS
T07929
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04120
Ubiquitin mediated proteolysis
rtem04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120915695 (UBE4B)
04120 Ubiquitin mediated proteolysis
120915695 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120915695 (UBE4B)
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120915695 (UBE4B)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
U-box type E3
120915695 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
120915695
NCBI-ProteinID:
XP_040182344
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All DBs
Position
10:140058678..140166306
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AA seq
1167 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRENPPGPPAAAQAPVSSHQLGLNVQGI
TPATSPIGGPGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVACEKSMSQV
DVDSGIENMEVDENDRREKGSLTDKEQSSDSEVSEEQSLQLVCKIFRVSWKDRDRDVIFL
RNLSAQFRQSPKEVFSNFKDLIGQILMEVLMMSTQSKDDNPFASLTATSQPIATTRLPER
TLTLNSGSSLSTSPMFCNTGSFGAGSVSSGTSSTESCGDHFTIEACKETEMLNYLIECFD
RVGIEERKAPKMCSQPDVSQFLSNIRSQCICHAALVLQGALTQPRSVQQPSLLVPYMLCR
NLPFGFIQELVRTTYQDDEVFRQIFIPVLQGLALAAKECSLDSDNFKYPLMALGELCEIK
FGKTHPVCSLLSSLPLWLPKSLSPATGRELQRLSYLGSFFSLSVFAEDDSKVVEKYFSGP
AITLENTRVVSQSLQHYLESARQELFKILHSVLLNGETREAALSYMASVVTSNMKKAQLQ
ADDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIFHPRCRIALPNDETRIKATMEEVT
SWMGELSQDSSSFSDPKFPTECFFLTLHAHHLAILPSCRRYIRRLRAIRELNRTVEELKN
NESQWKDSPLATRHREMLKRFKTQLKKLVRCKACADAGLLDENFLRRCLSFYGMVIQLLL
HMMDPAYPSMTLPLNPDIPKMFAALPEFYVEDVAEFLFFIVQYAPQVLFESSTQDIGTFL
VVLLCNQNYIRNPYLVAKLVEVMFVTNPAIQHRTQKFFEMIEGHPLSVKLLVPSLMKFYT
DVEHTGATSEFYDKFTIRYHISTIFKSLWQHPAHHGTFMEEFNSGKQFVRYINMLINDTT
FLLDESLESLKRIHEVQEEMRNKELWEQLPRDQQQARQSQLAQDERVSRSYLALATETVD
MFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQL
TDIYLNLDCPRFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIV
ARNARAEIDYSDAPDEFRDPLMDTLMLEPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTL
TENMLEPVPELKERILVWMREKHNSDQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgacgagatcagacgtaggcgcctggctcgacttgctggtggg
ccgtcctcacagcccacaacgccgcttacttctccgcagagagagaatccccctggacca
ccagcagcagcacaagcccccgtctcctctcaccagctcggcttaaatgttcagggcata
accccagctacctcacctatcggagggccaggggtggcccatcgtagccagagcagtgag
ggggtcagttcgctcagcagttccccatcaaacagccttgaaacccagtctcagtccctg
tcccggtcccagagtatggacatcgacagcgttgcctgtgagaaaagcatgtcccaggta
gatgtggactcagggattgagaacatggaggtggacgagaatgaccgcagggagaaggga
agtctgaccgataaggaacagtcttcagactccgaggtgtcggaggagcagtcactgcag
ctggtctgcaaaattttccgggtatcttggaaggaccgtgatcgggatgtcatcttcctg
agaaatctgtctgctcagttcagacagagccctaaagaagtcttctccaattttaaggac
ttaattggacagattttaatggaagtcttgatgatgtccacacagtcgaaagacgataat
ccgttcgctagcctgacggctacatcacagccaatcgcaaccacaagactgcctgaaagg
acgttgactctgaattctgggtccagtcttagcaccagtcctatgttctgtaatacagga
tcgtttggtgccggctccgtatccagtggaactagcagtacggagtcatgcggcgatcat
ttcacaattgaagcttgcaaagagacagagatgcttaactacctcattgaatgctttgac
agagtgggaatagaggagaggaaagcaccaaagatgtgcagccagccagatgtgagtcaa
ttcctgagcaacattcggtcccagtgtatctgccatgctgcgctggtgttacagggagcg
ctcacccagccaaggtctgtacagcagccgtctctcctggtgccatatatgctctgtagg
aatctaccctttgggtttattcaggaacttgtgaggacgacctatcaggacgatgaagtg
ttcagacagatatttattccagttctgcaaggtttggctctagctgctaaagaatgttct
ctggacagcgataacttcaaatacccactaatggcgttgggtgagctctgtgagattaag
tttggaaaaactcatcctgtatgctctttgctatcatctttgcccctttggttgcccaag
tctttgagtccagccactggcagggaactacagcgcctgtcttacctaggatccttcttc
agcctttctgtgtttgcagaggacgatagtaaagttgtggagaaatacttctctggccca
gcaattactctagagaatacccgagttgtcagccagtcgctacagcattacttggagtcg
gcgcggcaagaattgtttaagattttgcacagcgtcttgctgaatggagagaccagagag
gctgccctaagctacatggcttccgttgtcaccagcaacatgaagaaggctcagctgcag
gcagacgaccgtcttgtgtccacagatggcttcatgctgaacttcctttgggtgttgcag
cagctcagtactaagattaagcttgagactgtggatcccatgtatatttttcaccccaga
tgtcgcatagcactgcccaacgatgaaacccgcatcaaagctaccatggaggaggttacc
agctggatgggggaactgagccaagattcatcttcattttccgatcccaagtttccaaca
gaatgtttcttcctgacattacatgctcatcaccttgccattttaccgagttgccggcgt
tatatccgtcgcctccgagcaatccgagagctgaacaggacagtggaagagctaaagaac
aatgaaagtcagtggaaggactccccattggccacccggcacagagagatgctgaaacgt
tttaaaacgcaacttaagaaactagtacgatgtaaggcctgtgctgatgctggcctacta
gatgaaaactttctaagaagatgcctcagcttttatggaatggttattcaactccttcta
cacatgatggatcccgcttaccctagtatgacgctgcctttaaacccagacattcccaag
atgtttgctgcactgcccgagttctatgtagaagacgtagccgagttcttgttttttatt
gtgcaatacgctcctcaggtcctctttgaatccagcactcaggatatcggaacgttcctg
gtggtactgctatgcaaccagaactatatcagaaacccttaccttgtggccaaactggtg
gaggttatgttcgtcacaaacccggccatacagcacaggacgcagaagttctttgaaatg
atcgaaggccacccattgtcagtcaaactcctggtgccctcactgatgaagttctacact
gatgttgagcacacgggtgccaccagtgaattctatgacaagtttactatccgctaccac
atcagcaccattttcaaaagcctctggcagcacccggcccatcatggcacttttatggag
gaattcaactcggggaaacaatttgtgcgttacattaacatgctgataaatgacaccacg
ttcctgctggacgagagcctggagtctctgaaacgcattcacgaggtgcaggaagaaatg
aggaacaaggagctctgggagcagctccctcgggatcaacaacaagcacgccagtctcag
ctggcccaagatgagcgagtctctcgctcctatctcgctttagccacagaaacggtagac
atgttccacattctcactaagcaagtgcagaagcctttcctgagacccgagttgggacct
aggttagctgctatgctaaacttcaacctacagcagttgtgtgggcccaaatgtcgagac
ttgaaggtggagaatccagagaaatacggatttgaaccaaagaagctcctggaccagctc
acggatatctatttgaatttagactgcccacggtttgcaaaggctatagcagacgaccag
agatcgtacagcaaagagctatttgaagaggttatttctaagatgaggaaagctggaatt
aagtccaccatcgccatagagaaattcaagctgcttgctgagaaagtggaggagattgta
gcgcgaaacgctcgtgctgagatcgattacagtgatgcaccggatgagttcagagatcca
ctgatggatacattaatgttggagccggtgagactgccatctggaaccatcatggacagg
tcaattattttgcgacacctcctaaactcgtccacggaccccttcaacagacagacccta
actgagaatatgcttgaaccagtgccagaactgaaggagcggatccttgtgtggatgcgg
gagaagcataactctgaccagtga
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integrated database retrieval system
