Rana temporaria (common frog): 120915762
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Entry
120915762 CDS
T07929
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120915762 (CHD5)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120915762 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
120915762
NCBI-ProteinID:
XP_040182470
LinkDB
All DBs
Position
10:149388499..149590051
Genome browser
AA seq
1954 aa
AA seq
DB search
MRGPLGSEEEPVEEQEDMSDEEERGMEEPEIEEEEFFPEEQVPAPRRKKPKKYKEIKATK
TKRRKKEGSDEEFSDNEEEMLLEKSDSEGSDYAPNKKKKKKLKEKKEKKNKRKKKDGEDE
DNEEGCIKEPKTSAQLMEEWGLDNVEYSFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPM
SKMMTVLGAKWREFSSNNPLKGSSAAAAAAAVAAAVETVAVAPPLLVEPLPPPQPPPIRK
AKTKEGKGPGVRKKSKSKDAKKKGKGKKTSTLKFKFGGMASKRKKGSSSDEDERDESDFD
SASINSSSIRSDLSGLGKRTKRRRKKKRADVGGEGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEDEEEGVEEEDEEDDHMEFC
RVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWKWIE
APSFAPAPPPLIDPLMPPPKPMEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMFRN
YQRKNDMDDPPPFDYGSGDEDSKSEKRKNKDPQYAKMEEKYYRYGIKPEWMMIHRLMNHS
LDKKGDIHYLLKWKDLPYDQCTWEIDDIDIPDYENLKVAYWDHRELMLGEEVRTPAKVRN
IRKLKDEKDKPPLTPIVDPTVKFDKQPWYINTTGGTLHPYQLEGLNWLRFSWAQGTDTIL
ADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPEFYVVTYTGD
KDSRAIIRENEFSFEDNAIRSGKKVFRMRKEAQIKFHVLLTSYELITIDHAVLGSIEWAC
LVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLDG
FLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI
LTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSS
GKLMLLQKMLKKLKDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAI
DRFNAPGAQQFCFLLSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKV
MIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMSKQELDDILKFGTEELFKD
YVEGDNKDVEDSSVIHYDDGAISKLLDRNQDATEDTEIQNMNEYLSSFKVAQYVVREEDG
VEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQG
DMREWQDDLSDNQSEYSVGSEDEDEDFEEKPEGQSGRRQSRRQLKNDRDKPLPPLLARVG
GNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLC
EPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEQVNGKCSTPDMIPEGTEN
RKCFDTASSDPTTPVPASPAPIQPGAVALSEKSETPSLLSEEVESTEQKPVQQSEPPPPT
EQEKEEPEEKSESVEGKEKQVKDGVEEEEEEKDSTEQTPKAEALPEEKSSEKPGLNSTQT
KTEDKELKSEEENKPEEKEECVKQQNGENCIKQEDESGKQDDGGKFKFMFNIADGGFTEL
HTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPCYLILNEPFKSE
IHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECL
AESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMS
ERSILSRLTNRGGEATVQGTFGSTQMYNNSFGPNFRGPGPGSMVNYSQMPMGPYVAASNG
PHPCYADRKSIESLLDGASLDRKGRPHDIIFIED
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgagggggcccctggggagtgaagaggagccggtggaggagcaggaagacatgtcagac
gaggaagaaagaggaatggaagagccggagatagaggaggaggaattcttccccgaggaa
caggtccccgctccgaggaggaagaaacccaaaaaatacaaagagatcaaggcgaccaag
acaaagaggaggaaaaaagagggcagcgatgaggaattctcggacaacgaggaggagatg
ttgctggaaaagtcggatagtgaaggaagtgactacgctcccaacaagaaaaagaagaaa
aagcttaaagaaaagaaagagaaaaaaaacaagcgcaaaaagaaagatggcgaagacgag
gataacgaagaaggatgtataaaggagccaaagacctcagcccagctgatggaggagtgg
ggtctggacaatgtggaatacagtttctctgaagaggattatcacacgctgaccaactac
aaggccttcagccagttcctgaggcctttaatagccaagaagaatcccaagatccccatg
tccaagatgatgaccgtgcttggtgccaaatggcgggagttcagctccaacaacccactg
aaaggcagctcggcggcggcagctgcagcggcggtggcggctgctgttgagactgtggcg
gttgctcctcccctccttgttgagcctctgccgcctcctcagcctccgcctataaggaag
gcaaagactaaggaagggaaaggccctggtgtcagaaaaaaatcaaaatccaaagatgca
aaaaagaagggcaaaggcaagaagacttcaacgctaaagtttaaatttggagggatggcg
agcaagcgaaaaaagggatcttcgagcgatgaagacgagagggatgagtcggattttgat
agtgccagtattaacagttcctccatccgatcggatctgtctgggctgggaaaaagaacg
aaacggagaaggaaaaaaaagcgagctgacgtcggaggagaaggagacggctatgagacg
gaccatcaggattactgtgaagtctgccagcaaggaggggagatcattctttgtgacact
tgtcctcgtgcctatcaccttgtctgcctggatccagaactggagaaagcccccgagggc
aagtggagctgcccacactgtgaaaaagaaggcatccaatgggagccaaaggaggaagag
gaggatgaagaggagggagttgaagaagaggatgaggaggatgaccatatggagttctgt
cgcgtctgtaaagacggaggggagctcttgtgctgcgacacttgcccctcctcctaccat
ttgcactgtcttaacccacccctgcctgaaataccgaacggtgaatggttatgcccgcgt
tgcacgtgtccgccattaaagggcaaagttcaacggatcctgcactggaagtggattgaa
gcgccttcgtttgcaccagcccctcctcctctgattgatccactcatgccaccacctaag
cctatggaagggattccagagagagagttctttgtcaagtgggcggggctttcttactgg
cactgctcatgggtgaaagaattacagctggagctctaccacacagttatgttccgaaat
taccaaagaaagaacgatatggatgacccgccgccctttgactacgggtcaggggacgag
gacagcaagagtgagaaaagaaaaaataaagacccccagtatgcaaaaatggaagagaag
tattaccgctatgggatcaagccagagtggatgatgatacatcggctaatgaaccacagt
ctcgacaagaaaggagacatccattatctgcttaagtggaaggacttgccctacgaccag
tgcacctgggagattgatgacatcgacattccagactacgagaacctcaaagtagcttac
tgggaccacagggagttgatgttgggagaagaagtgagaactccggccaaagttcggaac
atcagaaaactgaaggacgaaaaagacaaacctccgctgacacctatagttgaccccaca
gtgaagtttgacaaacagccgtggtacatcaacaccaccggtggcactttgcacccatac
caactggagggactcaactggctgaggttttcctgggcgcaggggacagacacgatcctc
gcagatgagatgggactagggaagaccgttcagacgatcgtgttcctctattctctctac
aaagagggtcactctaaaggtccgtaccttgtgagcgctccgttatccaccatcatcaac
tgggagcgagaatttgaaatgtgggcgccggagttttatgtggtgacgtacactggcgat
aaggacagcagagccattattcgggaaaacgaattctcctttgaggacaacgccatcaga
agtgggaagaaagtgttcagaatgagaaaagaagctcaaataaagttccacgtgttgctg
acatcgtacgaactcattacgatcgaccatgcagtcctgggctccatcgagtgggcgtgt
ctggtggtggatgaagctcacagactcaagaacaaccaatcaaaattctttagggtatta
aatagctacaagatcgactacaaactgctgctcactgggacgccgctccagaataacctc
gaggaactctttcatcttctcaacttcctgacccctgagagattcaacaatctggacggg
ttcctggaagagtttgccgatatctccaaggaagaccaaattaaaaaactccatgacttg
ctggggcctcacatgctacggcggctgaaagcagatgtcttcaagaacatgccggccaaa
acagaattaatagtgcgggtggagctcagccaaatgcagaagaagtattataagttcata
ttgacccggaattttgaggcattgaactctaaaggtggaggaaaccaggtgtccctgctg
aatatcatgatggacttgaagaaatgctgcaaccacccgtaccttttccctgtagctgct
gtggaggcgccggtgttgccaaacgggtcttacgatggaagctctttagtgaaatcctcc
gggaagttgatgctgctacaaaaaatgctgaagaagctgaaagacggaggacaccgagtc
cttatattctctcagatgacaaaaatgctggatttacttgaagatttcctggagtatgaa
ggctacaagtacgagcggatagatggcgggatcacaggagggctgcgccaagaggcaatt
gacaggtttaatgctccaggagctcagcagttctgtttcttactgtctaccagagctgga
ggtctcgggatcaacttggccaccgctgacaccgtcgttatctacgactccgactggaac
ccccataatgacattcaggcttttagccgagcacatcgtatcgggcagaataaaaaggta
atgatctaccgttttgtcacacgggcctctgtagaggagagaatcacccaggtagccaag
aggaaaatgatgctcactcacctcgtcgtacgtccggggctcggctccaaatctggctcc
atgtcgaagcaagaactggatgatattttaaagtttggaaccgaagagttgtttaaggac
tatgttgaaggtgacaataaggatgttgaagacagcagtgtcatccactacgacgatggc
gccatctcaaaactgctggaccggaaccaagacgctacagaggatactgagatccagaac
atgaacgagtacctgagctctttcaaagtggctcagtatgttgtgcgggaggaggacgga
gtggaggaagtggagcgggaaatcatcaaacaagaagagaacgtggatcccgattactgg
gagaagctgctgcgtcaccattatgagcagcagcaggaagacctcgccaggaatcttgga
aaaggaaagcggatccgtaagcaagtcaactacaatgatgcttctcaggaggatcaaggt
gatatgcgcgaatggcaagatgatctctctgacaaccaatcagaatattccgttggctca
gaggatgaagacgaagattttgaggagaagcctgaaggtcagagtggcaggagacagtct
cgaagacagctgaagaatgaccgggacaaaccactcccaccgcttttagcgagggtcgga
gggaatattgaggttcttgggtttaacgctagacaacgtaaggccttcctaaatgcaata
atgagatggggaatgcctccgcaggatgccttcaattcacactggctcgtccgggacctc
cgtggaaagagcgagaaagaatttagggcgtacgtgtctttgtttatgagacacctctgt
gaaccgggggctgacggggcagaaacctttgccgacggcgtcccaagagaaggactttct
cgccagcatgtcctcaccagaatcggagtcatgtcactggtccgaaagaaggtccaggaa
ttcgaacaggtcaatggcaagtgcagcaccccggatatgattccagaggggacggagaac
aggaaatgttttgacacggcttcttcagatcccaccacgccggttccagccagtcccgct
cccatacagccaggtgctgtggctctttcagaaaaaagtgagacgccatctttgttatct
gaggaagtggagagcacggaacaaaagcccgtacagcagtcagagcctccgccgccaacc
gaacaggagaaggaagaacctgaagaaaaaagtgagagtgtagaaggaaaagaaaagcaa
gtaaaagatggtgttgaagaagaagaagaggaaaaagactctactgagcagactcctaaa
gctgaagcacttccagaagagaaatcctcggaaaaacccggactgaacagcactcagacc
aaaaccgaggacaaggaactcaagtcagaagaggaaaacaaacctgaggaaaaagaagaa
tgtgtgaagcaacaaaatggagaaaattgtataaaacaagaagacgaaagcgggaaacag
gatgatggcggaaagtttaaatttatgtttaacattgcggacggcgggttcacagaactc
cacacgttatggcagaacgaagaacgagccgccgtctcttctggcaaaatctacgacata
tggcacaggaggcacgattattggttgcttgctgggattgtcacacatggctatgcccgc
tggcaggatatacagaacgacccttgctacttaatattaaatgagccttttaaatctgag
atacacaaaggaaactacctggagatgaagaataaatttctggctcgaagatttaagctt
ctggaacaagcacttgtaattgaagaacagctgagaagagccgcctatctcaatatgacc
caggaccccaaccacccagccatggcgctgaatgcccgactggcggaagtggagtgcctc
gctgagagccatcagcatctctccaaagagtctctggcagggaacaagcctgctaatgcc
gtcctacacaaagtgctgaaccaactggaagagctgctgagtgacatgaaggccgatgtg
acccgtttgccctccatgctgtcccggatacccccggtggcagcccgcctgcagatgtcc
gagcgcagtattctcagccggctgaccaaccgaggaggagaagccacagtccaggggacc
tttggctccacacagatgtacaacaatagttttggtccaaacttccgagggcccggtcca
ggcagtatggttaattatagccagatgcccatgggcccctacgtggcagcttcaaatggg
ccgcacccttgttacgcggacagaaagtcgatcgagtccctcctggacggagcatcgttg
gatcggaagggaagaccccacgatatcatttttattgaagattaa
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integrated database retrieval system
