Rana temporaria (common frog): 120915774
Help
Entry
120915774 CDS
T07929
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00310
Lysine degradation
rtem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120915774 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120915774 (PRDM2)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120915774 (PRDM2)
Enzymes [BR:
rtem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
120915774 (PRDM2)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120915774 (PRDM2)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120915774 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
DUF5810
zf-H2C2_2
zf-C2H2_11
zf-C2H2_ZNF462_1st
zf-C2HE
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
120915774
NCBI-ProteinID:
XP_040182496
LinkDB
All DBs
Position
10:complement(152101799..152161149)
Genome browser
AA seq
1411 aa
AA seq
DB search
MKDSSDALNEDDTKTLASPVLSLEQTAVIQEMVNQNVLPENISISALELLTLPDNQGVED
ATADLELADDLRRDGSERDSINQEEESAELLDDLRSTSDETPEGSPKKKPLKASKPKGDV
NGEPSEGFMFPCQHCERKFTTKQGLERHMHIHISTINHAFKCRYCGKAFGTQINRRRHER
RHEAGPKRKTLMVSSSGELGQSHKHIIDSLKSSEEYSSSRLQCKMTDSDRETSHSVLSEE
NGESSRELHPCKYCKKVFGTHTNVRRHQRRVHERHLIPKGVRRKGHLLEDPLFQAEQSPQ
VENIYVASTEVEDEGEADDVYIMDITNNISENLTYYIDGKIPSSSTGTSCDVIEVEASTT
EVLGINCLLTPIKVEVSQNLRPLQTATDNPNLASDSSCSAILEPKKRRTVSPPLLSKIKT
EVDLEAVTPSCSLSIPLSVSVGENLPFQKEKNFYLSSKLKQLLQTQESSKSPVSPSLLSE
IPKLSPAVSSIPTGPNRFKRRTASPPSSPQHSPALNEFVKQEGKTSFSEGLGPKIPKLES
HNSSPAWSLSGKDERESLSPCCEDLKVNKEWTSNISFGNVCNQQPLDLSSGVKQKCEGKG
HSQVPWESVLDLSIGRKPVCDAEGKEYKGSNLCIGVKKKKPTTCMLKKVLLNEYDGLEVP
GEEASPPDALLLTCRTDGRRHLPELVAASGGDVGLSLEDASLTPAESTCTPVCQSPPVLT
PSEAPSHSPSPQLVTDTTYPPPLLTTNAPSLPDSSCSVPPTPSCPSPLSASTQSPLPVLS
RTASPSQSLSPTTDDPSGCASPGPPTLSSSSSSSSSSSCAASSSSSSTCSSPPPLSVVSS
IVSPSLNSESSTMVFVKQEKLEDEAVSKDSFQSGQHDSEGINKIFVCNVCESPFMSMKEL
AKHLVVHAEEWPYKCEFCVQLFRDASHLTDHRSVLHGVGKIFVCSLCKKEFAFLCNLQQH
QQDLHADKEYSHHELESGSLRPQNFTDPTKANLLQNQRLDEEPMTPEDDGELNDSSEELY
TTIKVMASGEKSKDPDVRMGLNQHYPSFKPPPFQYHSKNPLAIGTTATNFTTHNIPQTFS
TAIRCTKCGKGVDNLPELHKHILVCASASDKKRYTPKKNPIPLKQTVMPKNGVGVVVLEP
AEKSSFRRMGQPKKLNFTLEISKMSSGKLKLGALKRKNQLIHKAILQKNKKAKQKSSLRF
GMSGSSHVCPYCNREFTYIKSLDKHASFSCPKKPPSPSTKKQSPKAHKKALYAKKHKASI
TRRTADAEIQMQATEAHLGKTRARSVTPSPPIQLPTIPIKTKQSVKAAPQAKSKKQNLPI
VRNSSPVRISKSQAAHDGKKTKKTPLQILPPTFDKAQRKLHLKMQKNKLQSKQKAKKKKM
DKFRGKSRERTGGPRTRSSADDGKQDSRSLY
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattcctcagacgctctcaatgaagatgataccaagactctggcttccccggtc
ctgtctctagaacaaacggctgtcattcaagaaatggtaaatcaaaatgtccttccagag
aatatctccatctcggctctggaactgctgacattgccggacaaccaaggtgtggaagat
gccacggctgatttggagcttgctgatgacctgcgaagggatggatctgagcgagattct
attaatcaggaagaagagagtgcagagttgctggatgacctccgaagtacatctgatgag
actccggaaggttctccaaagaagaagccccttaaagcctctaaacccaaaggagatgtc
aatggggagccgtctgagggatttatgtttccatgtcagcattgtgaaaggaaatttacc
acaaaacaagggctagagaggcacatgcacatacatatttccaccatcaaccatgcgttt
aaatgtcgatattgcggaaaggcatttggaacccaaattaaccgcagacggcacgagaga
cgccacgaggctggccctaaaaggaaaacactaatggtgtcctcttctggtgaacttgga
cagtctcacaaacatattatagactctctgaagtccagtgaggagtacagcagctccaga
cttcaatgtaaaatgaccgattctgacagagagacctcccattctgtcctctctgaggag
aatggagagtccagccgagagcttcacccatgcaagtactgtaagaaagtgtttgggact
cacacaaacgtgaggagacaccagcgtagagtccatgaacggcatcttatcccgaaggga
gtgaggcgaaaaggacatcttctggaagatccgctcttccaggcagagcagtctccacaa
gtggaaaacatttatgtagcgagtacagaagtagaagatgaaggagaagcagatgacgtc
tatatcatggacattaccaacaacatctctgagaacctcacctactacattgacggcaag
atcccatctagcagcacaggtaccagttgtgatgtcatagaagtggaggcaagcaccact
gaggtcttaggaatcaattgcttgcttactcccatcaaggttgaagtttcacaaaactta
aggccgctgcagactgcaaccgataacccaaatctagcaagtgactcttcctgtagtgca
attttagaaccaaaaaagaggagaactgtcagccctcctttactgtcaaaaatcaaaact
gaagtcgaccttgaagccgtcactccttcctgctccttgtcaatcccattaagtgtttct
gttggtgagaatttgcccttccaaaaagagaaaaatttctatttgtcttcaaaacttaag
cagctgctgcagacacaggaaagtagcaaatcacctgtgagtccttcattgttatcagag
atcccaaagctgagcccggctgtatcttccattccaacgggacccaaccgcttcaaaaga
cgcaccgcttcccctccgagctccccacaacacagcccagctctaaatgaatttgtcaaa
caagaaggaaaaacctctttcagtgaaggacttggtccaaaaataccaaagttggaaagt
cacaacagttcacctgcatggagtttgtctggtaaagatgaaagggagagcctaagtcct
tgttgcgaggatctaaaggtcaataaagagtggacttccaatatatcctttggtaatgtt
tgcaaccagcaaccattagacttgtccagtggagtcaaacagaaatgtgaaggcaagggc
cactcccaggttccttgggaatctgtacttgacctcagcataggcaggaagcctgtctgt
gatgctgaaggaaaggagtacaaagggagtaacttgtgcattggagtaaaaaagaagaag
cctaccacatgcatgttaaagaaggttctattgaatgaatatgatggtttagaggttccg
ggtgaagaagcttcaccaccagatgcacttttgcttacctgtagaacagatgggagaaga
catctacctgaacttgttgctgcctcaggtggtgatgttggtctttctctggaagatgct
tccctcactccagctgagagcacctgtaccccagtttgccaatccccacctgtcctgact
ccttcagaagcaccttcacattctccatctccacagcttgtgacagacactacatatcct
ccacctcttcttactacgaatgccccttccctcccggattcttcatgtagtgtaccaccc
actccatcatgtccatcccctctgtctgctagcacacaatctcctcttccagttctttcc
cgtacagcatcaccctcccagtctctttccccgaccactgatgatccttctggttgtgct
tcacctggtcctcctactctgtcctcctcctcatcctcctcctcttcttcttcttgtgct
gcctcatcctcgtcttcctcaacctgttcatctcctcctcccttgtctgtggtttcatct
atcgtatctccctctttaaactcggaatcctcaacaatggtgtttgttaaacaagagaaa
ctcgaagatgaagcagtctcgaaggattccttccagtcaggtcagcatgactctgaaggt
attaataagatttttgtgtgcaatgtttgtgaatcgccctttatgtctatgaaagaactt
gccaaacacctggtggtgcatgccgaagaatggccctacaaatgtgaattttgtgtgcag
cttttccgagacgcttcccatcttacagatcatcgctccgtgcttcatggagtggggaag
atttttgtttgttccttgtgcaaaaaggagtttgcttttctttgtaatttgcaacaacat
cagcaggacttgcatgctgataaagagtatagtcatcatgaattggaaagcgggtccctc
aggccacagaactttactgacccaacgaaggcaaatttactccaaaatcagagattggat
gaggagcccatgactccagaggacgatggcgaattaaatgactcttctgaagagctgtac
acaacaattaaggttatggcttcaggggaaaagtctaaagaccccgatgtacggatgggt
cttaatcagcactaccccagtttcaaaccaccgccctttcagtatcacagtaagaatccc
ttggctatcggtacaacggcaacaaactttacaacccataatattccacagactttctct
acagctatccgttgtacgaaatgtgggaagggcgtggacaatttgcctgagttacacaaa
catatattagtatgcgcatcagcaagcgataaaaaaagatacactcccaaaaagaacccc
atccccctgaaacagactgtgatgccgaaaaatggtgtaggggttgtggttcttgaacct
gccgagaaaagttcattccgaagaatgggccaaccgaaaaagcttaattttaccctggaa
ataagtaaaatgtcttcaggaaaactcaaactgggcgcacttaaaaggaaaaaccagctc
attcacaaagcaatattacaaaagaataagaaggccaagcaaaagtcaagtctacgattt
ggcatgtctggttcttctcatgtttgcccgtactgcaaccgagagttcacctacattaaa
agtctggacaaacatgcctcattcagttgtccaaaaaagccaccctctccgtctaccaaa
aaacaatctcctaaagcccacaaaaaggccttgtatgccaagaaacacaaagccagcatt
acgcgacgcacagcagacgctgagatacaaatgcaagcaacagaagcacatttggggaaa
actcgagccaggagtgtaacgccctcgcctcctatccagttacctacaattcctataaag
actaagcaaagtgtaaaagctgcccctcaggccaagtccaagaagcagaacttgcccatt
gtaagaaactccagcccagtcaggatatcaaagagccaagcggctcacgatgggaaaaaa
acaaagaaaacgccacttcagatcctaccaccgaccttcgacaaagcgcaacgaaagtta
caccttaaaatgcaaaagaacaaactgcagagcaagcagaaggcgaagaagaaaaagatg
gacaagttccgtgggaaatcccgagaaaggactggcgggccccgaacccgaagctctgca
gacgatggaaagcaagactccaggagtctgtattag
DBGET
integrated database retrieval system