Rana temporaria (common frog): 120916533
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Entry
120916533 CDS
T07929
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03030
DNA replication
rtem03410
Base excision repair
rtem03420
Nucleotide excision repair
rtem03430
Mismatch repair
rtem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120916533 (POLD1)
03410 Base excision repair
120916533 (POLD1)
03420 Nucleotide excision repair
120916533 (POLD1)
03430 Mismatch repair
120916533 (POLD1)
03440 Homologous recombination
120916533 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtem03032
]
120916533 (POLD1)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120916533 (POLD1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120916533 (POLD1)
DNA replication proteins [BR:
rtem03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
120916533 (POLD1)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
120916533 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
120916533 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
120916533
NCBI-ProteinID:
XP_040183498
LinkDB
All DBs
Position
10:complement(38577582..38898482)
Genome browser
AA seq
1104 aa
AA seq
DB search
MDFKRKKGFPASQTKKKKSDWDDDGPSQFEEELAFLDEVEADMALEMNEAHSDADMLPVV
KLSDKISPKWLRPSLPHIDPLKDSVCFHQIELDHYVGTPVPGMLGATQGPVPIIRVFGIT
ADGNSVFCHIHGFAPYFYVPCTTGFKQEHLSDFKKELNDAVIKDMRSNKDNISQAVLAVD
ICMKENMYGYHGKRSIPFLKITMALPRLIAPAKRLLEQGLRFGTFPTQSYQAYEANIDFE
IRFMVDNDIVGCNWIELPAGKYRIRKESQVDDQTKDNTMKVSLAQLEVDVSWADLKSHPA
EGEWQKIAPLRVLSFDIECAGRKGVFPEADKDPVIQIANMVLRQGEKDPFIRNVFTLNTC
SSIVGSQVLCFERENDLLKAWAEFVRIIDPDIITGYNIQNFDLPYLINRAQSLKVSTFPF
LGRIRSMKSVIRDSSFQSKQMGRRENKVINTEGRVQFDLLQVLLRDYKLRSYTLNAVSYH
FLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLMEKLMCVINYMEMARVTG
VPLNYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKSEGGEDYTGATVIEPVKGYYDVPIAT
LDFSSLYPSIMMAHNLCYTTLLQSGSIERYGLSPEDFIKTPTGDQFVKATVRKGLLPEIL
ENLLSARKRAKTELKKETDPFKQKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSV
TGFGRQMIEKTKQLVESKYTLANGYKGDAKVIYGDTDSVMCKLGVKTVTEAMEIGREAAE
WVSSHFTPPIKLEFEKVYFPYLLINKKRYAGLYFSSSPDTHDKMDCKGIETVRRDNCPLV
ANLINTCLQKSLIDRDPMGAVEHAKDVISDLLCNRIDISQLVITKELTRTADEYAAKQAH
VELAERMRKRDPGSAPNLGDRVPYVIIGAAKGAAAYMKSEDPIYVLENNIPIDTRYYLEQ
QLAKPLLRIFEPILGESKAETILLKGEHTRCKTVLTSKVGGLMAFAKKRSTCIGCKASLT
HDGAVCNYCKTRESELHQKEISHLSSLEEKFSRLWTQCQRCQGSLHEDVLCTSRDCPIFY
MRKKVQKDLDDQETLIRRFGPPAW
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaagcgtaaaaaaggtttcccagcctcccagaccaaaaagaaaaaatcagac
tgggatgatgatggcccctcacagtttgaagaggaactggcattcctggatgaagttgaa
gcagatatggccttagaaatgaatgaagcgcattctgatgcagatatgttgcctgttgtg
aaactgtcggacaagatttcaccaaagtggctccggccttctcttccccatattgatcct
cttaaggattctgtgtgcttccatcagattgaactggaccattatgtgggaacacctgtg
cctggaatgttgggagccacgcagggaccagtccctataattcgggtgtttgggatcaca
gcagatggcaacagtgtattctgccacatccatggttttgctccttacttctatgtaccc
tgcacgactggttttaagcaggaacatttaagtgacttcaaaaaggagctgaatgatgct
gtaatcaaggacatgcgttctaataaagacaacatatcgcaggctgttctggctgttgac
atctgtatgaaagagaacatgtatggataccacgggaagcggagtatacctttcctgaag
atcaccatggctcttccacgattaattgcacctgctaaacgtctcttagaacagggtttg
cggtttgggaccttcccgacacaaagctaccaggcctacgaagccaacattgactttgaa
atcaggtttatggtggacaatgatattgttggatgtaactggattgaactccctgctggc
aaataccgaattcgtaaagaaagccaggtagatgatcagactaaggacaataccatgaag
gtgtctcttgctcagctggaggttgatgtcagctgggcagatcttaaaagtcaccctgct
gagggtgagtggcagaagattgcccctcttcgtgtgctcagctttgatatagaatgtgca
ggaagaaaaggtgtatttcctgaggctgataaagaccctgttattcagatagcgaacatg
gttcttaggcaaggggagaaagaccctttcatccgcaatgtttttactctgaacacctgc
tcaagtatagttggttctcaagtgctttgctttgaaagggaaaatgacctgttgaaagcc
tgggcagagtttgtgcgcattattgatcctgatatcataactggctacaatattcagaat
tttgacttgccatatctaatcaaccgagcacagagtcttaaggttagcacgtttcctttt
cttggaagaattcgaagcatgaagtctgttatacgggactcttccttccagtctaagcag
atgggtagacgagaaaacaaagtcatcaacacagagggtcgggttcagttcgatctcctg
caggtacttcttagagactacaagctgcgttcatacactctgaatgctgtcagttaccat
tttctgcaagaacagaaggaagatgtacagcactcgatcatcactgatctacagaatggg
aatgaacaaacaaggagaaggctggctgtgtactgcctgaaggatgcctatttaccactt
cgtcttatggagaagctcatgtgtgtcataaattacatggaaatggctcgtgtgacaggt
gtacctctcaattacctgttatcacgtgggcagcaaataaaggtggtctcacagctactc
agacaggcaatgaagcaagatctggtgatgcctgtggtaaaatctgaaggtggtgaagat
tacactggggctactgtcattgaacctgtgaaagggtattatgatgtccccattgccact
cttgatttttcatccctgtacccatctataatgatggctcacaatctgtgttatactacc
ctgctgcagagtggatccattgaaagatatggactcagtcctgaagactttatcaagact
ccgacaggcgatcaatttgtaaaggcaactgtacgaaaggggcttctgcctgagatcttg
gaaaatcttttgtccgctcgaaaacgagcaaagactgaattgaagaaagagaccgatcct
tttaagcagaaggttttggatggacgccaactggcattgaaagtgagcgctaactctgtg
tatgggtttacaggagcacaagttggaaaactgccctgtctagagatttcacagagtgtc
actggctttgggagacagatgattgagaagaccaagcagttagtggaatcaaaatatact
cttgccaatgggtacaaaggagatgccaaggtcatctatggtgacacagactctgtgatg
tgcaaactgggagtgaagaccgtgactgaagctatggagattggaagagaggcagctgaa
tgggtatccagtcacttcactccccctattaaattggagtttgagaaggtatattttcct
tacctgttgatcaacaagaagagatatgctggactatatttctcctcaagcccagacacc
cacgacaagatggactgcaagggtattgagactgtacggagggataattgcccactggtg
gccaaccttatcaacacttgtctgcagaagagtcttattgacagagatccaatgggcgct
gtggagcatgccaaagacgtgatctctgatttactatgtaatcggatagacatctcccag
ctggtgattacaaaggagctgactcgtacagcagatgaatatgctgcaaagcaggctcat
gtggagctggcagagagaatgagaaagagagaccctgggagtgctccaaacttgggagac
agagtgccttatgttatcattggagctgcaaagggtgcggctgcctatatgaagtctgag
gaccctatttatgtacttgaaaataacatacctattgacacacgatattacttggagcag
caactggccaaacccctgctgagaatctttgaacccatactgggggagtccaaggctgaa
accatacttctaaagggagaacatactcgttgcaagacagtccttacttcaaaagttggt
ggcctcatggcatttgccaagaaacgcagtacctgtatcgggtgtaaagcctcattaact
cacgatggtgcggtgtgcaattactgcaagacacgagaatctgaactacaccagaaagag
atctctcacctgagttcactggaagaaaagttttctcggttgtggacacagtgccagcgc
tgtcagggaagtttacacgaggatgtcctgtgcacaagtcgagactgtcccatattctac
atgagaaagaaggtccaaaaagatctagatgaccaggagacgctgatccggcgatttggc
ccacctgcatggtaa
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integrated database retrieval system
