Rana temporaria (common frog): 120916536
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Entry
120916536 CDS
T07929
Symbol
NR1H2
Name
(RefSeq) oxysterols receptor LXR-beta isoform X1
KO
K08535
liver X receptor beta
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120916536 (NR1H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120916536 (NR1H2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rtem03310
]
120916536 (NR1H2)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120916536 (NR1H2)
Nuclear receptors [BR:
rtem03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
120916536 (NR1H2)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
120916536
NCBI-ProteinID:
XP_040183503
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Position
10:39420428..39647707
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AA seq
441 aa
AA seq
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MSATAVDGSDVSLDGESFHTVDTFLLDSASTTKLTIKEERSESQGSSSLPTENEILATDG
EGSSHSAAEEPERKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKN
AKYTCKNNGKCQMDMYMRRKCQECRLRKCREAGMREQCVLSEEQIRSKKIKKQQDDDVVR
SSAVLAPPSPSMLTQDVVHLTPQQEEMIQQLVSAQQQCNKRSFSDQPKVTPWPLANDPNS
REARQQRFAHFTELAIISVQEIVDFAKQVPGFLELSREDQIALLKASTIEIMLLETARRY
NHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRGMRQMQLDDAEYALLIAINIFS
ADRPNVQNHQLVENLQLPYVEALHSYTRIKRPQDHLMFPRMLMKLVSLRTLSSVHSEQVF
ALRLQDKKLPPLLSEIWDVHE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccacggctgtcgatggctctgatgtgtcacttgatggagaatctttccacact
gtggatacgtttctattggattctgctagcaccactaagttaactataaaggaggagaga
tcagagtctcaaggaagttcctcgctacctactgaaaatgaaatcctcgcaacagatggg
gagggctcctctcacagcgcagcagaggagccagaacgtaaaaggaagaagggtcctgca
ccaaagatgttgggtaatgaagtttgcagtgtgtgtggagataaggcctccggctttcac
tataatgtgctgagctgtgagggctgtaaaggctttttcagacgcagtgtaataaagaac
gccaaatacacttgcaagaacaatggcaagtgtcagatggacatgtacatgcgccgcaag
tgccaggagtgcaggctccggaaatgcagagaggctggcatgcgggagcagtgtgttctg
tctgaagagcagatccgtagcaaaaagatcaagaaacagcaagacgatgatgttgttcgc
tcatctgcagttctggctccacctagcccttccatgctgacccaggatgttgtccatcta
acgcctcagcaagaggagatgatccaacaactagtatctgcccagcaacagtgcaacaaa
aggtccttcagtgatcagcccaaagtaacgccatggcctctcgccaatgaccccaacagc
agagaagctcgccaacaacgctttgctcactttactgagttagccatcatttctgtgcag
gagattgtggattttgccaaacaggttcctgggtttttggaattgtctcgagaggatcag
atagcacttttgaaagcatccaccatagagataatgctgctggaaacagcgaggcgctac
aatcatgagactgaatgcataacatttctgaaggactttacatacagtaaggatgacttc
catcgagcaggactacaggtggaatttataaaccccatttttgagttctcacgtggaatg
aggcagatgcagttggatgatgcagagtatgctctacttatagcaatcaacatcttttct
gctgacagaccaaatgtgcagaatcaccagctcgtagagaatcttcagctaccatatgtg
gaagctctgcactcctacactcgtatcaagagacctcaggatcacctgatgtttcctcgt
atgttaatgaagctggtcagcctgcgaactttaagcagtgtgcactcggaacaggtgttt
gctctgcgcctacaggacaaaaaactgccaccattactgtctgaaatttgggatgttcat
gagtag
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